Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01829 ATGATGGGATTGGTTTATGGGACAAAGGTGGTAGGATATGGTCTCCTCTGCTTCTTCTTTGTACTTCTCCTTCTTCAACTTACTTCTGCACAAGAAGGTTTTGTGAGTTTACAGTGTTGTGCTCCATCAAACATAACTGATCCCAATACCAAAATAAGTTGGATTTCAGATGTCAATCTGTTCCCAAACAGAACAGAATGCCAGGACATTTCTATTCCAGTAGCTAACGATACAAGCTATAAGCATGCTCGAATTTTCGGTGCTGATTCTGGAAATAAATGGTGTTATAACTTGACGACAATTAAGGGTCGAGATTATATGTTAAGGGGTACATTCATCCATGGCCTTATCCTGCGTACTTCTCTGGATACCATCTTCAACGTCTCGATTAGTGCGACGTCGATAAGTCGAGTGAATTCTTCCGTCGATTCGTTGGAGGTCGAGGGTATTTTCAGAGCTACTAATCACTATGTAGACTTCTGTTTAGTGAGGGGAAAGGGTAATCCTTACCTTTCAAAGCTAGAATTAAGGCCTTTAAGTGATTTGGTTTACTTGAAGAATGATCCATCTAGTGTTTTAACGCTGGTTAGCAGGGTGGATGCTGGGAACACAAATGGGCTGATCAGGTATCCGCTTGATCTGAATGATCGAATCTGGAAAACTAGTGCAAATGGAAATGCTAATTATCCAATATCATTATCCAATGCCAACGTCTCCGTCAACGGCGCTAATGCATCTATACCACTTCAAGTGCTACAAACTGCCGTGATTGATGCAGAACGGTTAGAGTTCCGGTACGATTACCTCGATGAGGGCGGTAATGACTATCTGATCTTCCTCTATTTTCTAGAGCTGAACGACTCCGTTAAGACGGGGCAAAGGGTGTTCGACATATATGCCAATGGAGTAAAGAAATATGGGAATTTTGATATATTGGAAGGTGGAAACAACTCCAATTATAGAGAAATTGTTCTGAATGTTTCTGTAAATAGGGTTCTTAATGTGTCCTTAGTCAAGGTCTCAGATGGTGTGGAGTTTGGACCCATTTGCAATGCTTATGAGATCTTTCAAATCCACAGATGGGTTGAAGGGACTCTCCATGAAGATGTTGATGCAATCGTAGAGTTGAGGGATGAGTTGGTGGCGGGAAACCCAGAAAATGAGGTATTGGGGAGTTGGTCTGGAGACCCATGTCTTCCTCTTCCTTGGGAAGGTCTCGTCTGCAAGCCCAGTAACGACGGATCTTTCGTCATCACAAAGCTGGATCTTTCGTCGAATGATCTTCAAGGATCTATTCCCCTATGCATCACTGATTTGACCCACATGAAGGAACTGAACCTGAGTTTCAATCGTCTCACAGGGACTATCCCGCCATTCTCAGCGTCTTCCATGTTGATATCAATGGATGTGAGGCACAATGAACTCATGGGGCCGATTCCAGAATCTCTTGCGTCTGTTCCACATTTAAAAAGATTGTACTTTGGGTGCAACCCTCACTTTGGAAATGACTTTCCTTCCAGCTTATTGAACCGGTCAAATCTTACCACAGACTCTGGAATCTGTGGTGGTCAAGGCTCTCCACGTTCGCCACAATGGATTTTAATAGGAAGTGTTGCAGCTGGGTCCCTCTTATTTGCTGTTGTCGCTGGAGTCATCTTTGTGTGCTTTTACAGACGACGGGTGTTGGCTCGAAGAAAATTGGATGGAGAAAAACACCCGATAACAAAGAATGTAGTTTTCTCTATACCCAGCATGGACGACTTTGATTTGAAGTCGATTTCCATACAGACTTTTACTTTGGAGTGCATCGAAACTGCCACCTGCCTGTACAAAACCTTGATAGGTGAAGGGGGCTTCGGATCTGTTTACCGTGGTACTCTACTTGATGGTCAAGATGTGGCTGTGAAGGTCCGGTCAGCGACCTCAACTCAGGGAACTCGTGAGTTTGAGAATGAGCTAAACCTTCTCTCAACTATTCGGCACGAGAATTTGGTTCCCCTTCTTGGCTACTGTTGTGAAAGTGATCAACAAATTCTTGTCTATCCGTTCATGTCCAATGGCTCTCTACAAGATCGCCTCTATGGGGAAGCATCGAAGAGAAAAACTCTAGACTGGCCAACCAGACTCTCCATTGCACTTGGTGCTGCGCGAGGTCTAATGTATCTGCACACATTTTCTGGGCGCTGTGTCATACATAGGGATGTCAAATCGAGCAACATTCTTCTGGATCATAGCATGAGCGCCAAAGTGGCAGACTTTGGTTTTTCCAAATATGCCCCTCAAGAAGGGGATAGTTGCGCTTCCTTGGAAGTAAGAGGGACGGCTGGATACTTGGATCCAGAGTACTATTCGACCCAACGTTTATCTGCAAAAAGTGATGTGTTCAGCTTTGGTGTGGTGCTTCTAGAAATTATAAGTGGCCGGGAGCCTCTCAATATACGTAGACCACGCAATGAGTGGAGTTTAGTTGAATGGGTATGGTCCCATATTGGGATATCTTTTCTACCTTCTAAAATAACTGCCTGTATGTTTATGTTATAG 2541 0.4388 MMGLVYGTKVVGYGLLCFFFVLLLLQLTSAQEGFVSLQCCAPSNITDPNTKISWISDVNLFPNRTECQDISIPVANDTSYKHARIFGADSGNKWCYNLTTIKGRDYMLRGTFIHGLILRTSLDTIFNVSISATSISRVNSSVDSLEVEGIFRATNHYVDFCLVRGKGNPYLSKLELRPLSDLVYLKNDPSSVLTLVSRVDAGNTNGLIRYPLDLNDRIWKTSANGNANYPISLSNANVSVNGANASIPLQVLQTAVIDAERLEFRYDYLDEGGNDYLIFLYFLELNDSVKTGQRVFDIYANGVKKYGNFDILEGGNNSNYREIVLNVSVNRVLNVSLVKVSDGVEFGPICNAYEIFQIHRWVEGTLHEDVDAIVELRDELVAGNPENEVLGSWSGDPCLPLPWEGLVCKPSNDGSFVITKLDLSSNDLQGSIPLCITDLTHMKELNLSFNRLTGTIPPFSASSMLISMDVRHNELMGPIPESLASVPHLKRLYFGCNPHFGNDFPSSLLNRSNLTTDSGICGGQGSPRSPQWILIGSVAAGSLLFAVVAGVIFVCFYRRRVLARRKLDGEKHPITKNVVFSIPSMDDFDLKSISIQTFTLECIETATCLYKTLIGEGGFGSVYRGTLLDGQDVAVKVRSATSTQGTREFENELNLLSTIRHENLVPLLGYCCESDQQILVYPFMSNGSLQDRLYGEASKRKTLDWPTRLSIALGAARGLMYLHTFSGRCVIHRDVKSSNILLDHSMSAKVADFGFSKYAPQEGDSCASLEVRGTAGYLDPEYYSTQRLSAKSDVFSFGVVLLEIISGREPLNIRRPRNEWSLVEWVWSHIGISFLPSKITACMFML* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01829 846 Gene3D Transferase(Phosphotransferase) domain 1 685 841 - -
Eupl13g01829 846 Pfam Malectin-like domain 39 358 IPR024788 -
Eupl13g01829 846 CDD STKc_IRAK 614 834 - -
Eupl13g01829 846 Gene3D Ribonuclease Inhibitor 368 517 IPR032675 -
Eupl13g01829 846 Gene3D - 194 359 - -
Eupl13g01829 846 SUPERFAMILY L domain-like 392 515 - -
Eupl13g01829 846 FunFam Lectin-domain containing receptor kinase A4.3 684 840 - -
Eupl13g01829 846 ProSiteProfiles Protein kinase domain profile. 608 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01829 846 FunFam Nodulation receptor kinase 573 683 - -
Eupl13g01829 846 Gene3D Phosphorylase Kinase; domain 1 614 684 - -
Eupl13g01829 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Eupl13g01829 846 SUPERFAMILY Protein kinase-like (PK-like) 593 829 IPR011009 -
Eupl13g01829 846 PANTHER OS07G0107800 PROTEIN-RELATED 35 825 - -
Eupl13g01829 846 FunFam Leucine-rich repeat receptor-like kinase 368 503 - -
Eupl13g01829 846 Pfam Protein tyrosine and serine/threonine kinase 612 812 IPR001245 GO:0004672|GO:0006468
Eupl13g01829 846 SMART serkin_6 608 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01829 846 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01829 Eupl-Chr13 38020172 38030966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01829 14 830 Receptor kinase-like Gene Family AT1G67720 35.824 6.09e-131 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Eupl13g01829 Malectin_like 3.2e-52 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01829 - - psom:113332712 1012.68