Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01820 ATGAAATCTGTAATCGAACGATATAACAAATCAAAAGAGGAACATCTTCAGCAGTTGAATCCAACTTCAGAAGTCAAGTTCTGGCAAAGGGAGGCAGCAAGCTTGAGGCAACAATTGCATAACTTGCAAGAAAACCATCGGCAATTGATGGGAGAAGAGCTTTCTGGTTTGAGTGTCAAAGATCTACAAAATCTAGAGAACCAATTGGAAATGAGTTTGCGTGGTGTCCGTATGAAGAAGGACCAAATTTTAACTGATAAAATAGAAGAACTAAACCGCAAGGGGAACCTCATTCATCAAGACAATATGGAACTGTATAAGAAGGTAAACCTCATTCGTCAAGAAAACATGGAATTGTATAAGAAGGTTTATGGAACAAGGGATGTAAATGGCGCAAACAGAAATTCCCTTCTTCCAAATGGTTTTAGCATTGGAGAGGACTTGCATGTGCCGGTCCATCTCCAGCTAAGCCAGCCACAGCAACAAAACTATGAGACACCAGCAAGAGCTACAAAGTTGGGCACACTACGACTGCATTAG 540 0.4093 MKSVIERYNKSKEEHLQQLNPTSEVKFWQREAASLRQQLHNLQENHRQLMGEELSGLSVKDLQNLENQLEMSLRGVRMKKDQILTDKIEELNRKGNLIHQDNMELYKKVNLIRQENMELYKKVYGTRDVNGANRNSLLPNGFSIGEDLHVPVHLQLSQPQQQNYETPARATKLGTLRLH* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01820 179 MobiDBLite consensus disorder prediction 159 179 - -
Eupl13g01820 179 Coils Coil 25 52 - -
Eupl13g01820 179 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Eupl13g01820 179 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01820 Eupl-Chr13 37867223 37909690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01820 1 173 MADS-box Gene Family AT3G57230 61.850 3.96e-70 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01820 K09264 - ming:122064455 320.087