Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01816 ATGGAAATGGGAAGCTCTTCTTGCTGTGATGATCAGAACGGCCTCAAGAAAGGCCCCTGGACTGCTGAAGAAGACCATAAGCTTGTCCAATACATTCAAAAAAATGGCCATGGAAGCTGGACAGCCCTCCCTAAACTTGCAGGTCTTAACAGATCTGGGAAGAGTTGTAAGTTAAGATGGAAAAATTGCTTGAAGCCTTCTATAGAAAGATACAAAATTTCCAAAGAAGAAGAGCAGACTATTCTCAATCTGCATTCCATCCTTGGCAACAATTGGTCGGCGATTGCAACACACCTTCCAGGCCGAACTGATACGGAGATCAAGAATTACTGGAACACCCATCTAAAGAAGAGACTGATTCAGATGGTTTTCGAACCCACGACACTTAACCCGCGTGAGAAATAA 405 0.437 MEMGSSSCCDDQNGLKKGPWTAEEDHKLVQYIQKNGHGSWTALPKLAGLNRSGKSCKLRWKNCLKPSIERYKISKEEEQTILNLHSILGNNWSAIATHLPGRTDTEIKNYWNTHLKKRLIQMVFEPTTLNPREK* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01816 134 CDD SANT 74 115 IPR001005 -
Eupl13g01816 134 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Eupl13g01816 134 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Eupl13g01816 134 SMART sant 69 117 IPR001005 -
Eupl13g01816 134 SMART sant 16 66 IPR001005 -
Eupl13g01816 134 CDD SANT 19 62 IPR001005 -
Eupl13g01816 134 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Eupl13g01816 134 Pfam Myb-like DNA-binding domain 74 115 IPR001005 -
Eupl13g01816 134 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Eupl13g01816 134 FunFam MYB transcription factor 72 119 - -
Eupl13g01816 134 Gene3D - 74 119 - -
Eupl13g01816 134 Gene3D - 14 70 - -
Eupl13g01816 134 FunFam MYB-related transcription factor 16 69 - -
Eupl13g01816 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 119 IPR017930 -
Eupl13g01816 134 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 132 - -
Eupl13g01816 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01816 Eupl-Chr13 37784858 37785578 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01816 3 132 MYB Transcription Factor Family AT1G34670 73.846 1.10e-65 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl13g01816 Myb_DNA-binding 1.7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01816 K09422 - mof:131159609 220.705