Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl13g01812 | ATGACAATCTGGTTTAAAGTAGGTTTAGTTATTTTGATTCTTTCAGTCATTTCGATTCAATCGGAATCAGCGGTTTCAAGTTTAGATCTAGGTTCGGAATGGTTGAAAGTTGCTGTTGTGAATCTAAAACGTGGACAGAGTCCGATATCGATAGCCATTAATGAGATGTCGAAGAGGAAATCCCCGGCGTTAGTTGCATTTCAAGGTGGGAATCGACTTATTGGTGAAGAAGCAGCTGGAATTATTGCCAGGTATCCTGACAAGGTATATTCTCAAGTCAGGGACATGATTGGAAAGCCATTTAAATATGTGAAGGATCTTGTTGAGTCCTTGTATCTACCATTTGATTTGGTGGAAGATTCGAGAGGTATGGTGGGTATTAGGACTGATGATGGTGTTACTGTTTATACGGTGGAGGAGTTGGTAGCAATGATACTTGGTTATGGTCGTAATTTGGCTGAGTTTCATTCGAAGGTGCCAATCAAGGATGTCGTTATCACGGTCCCGCCATACTTTGGGCAGGCAGAGCGGAAGGGTTTGCTTCAGGCTGCACAACTGGCGGGTATCAATGTGCTGTCGCTTATGAATGAGCACAGTGGTGCGGCTCTTCAGTATGGGATTGATAAGGATTTCTCAAATCAGTCACGGCATGTTATATTCTATGATATGGGTTCAAGTAGTACTTATGCTGCTCTTGCCTACTTCTCGGCTTATAATTCGAGGGAGTTCGGGAAGACAGTCTCAGTTAATCAATTCCAGGTCAAGGATGTTAGATGGGACACGGAACTCGGGGGTCAAACTATGGATTTGCGTTTGGTGGAGTATTTTGCGGATGAGTTCAATAATCAAGTTGGAAATGGGGTAGATGTGAGGAAGTCCCCCAAGGCAATGGCTAAATTGAAGAAACAAGTTAAACGTACTAAAGAAATTTTAAGTGCAAACACAATGGCTCCAATATCAGTTGAATCTCTTTATGATGATCGTGACTTCAGAAGCACTATAACTCGTGAGAAATTCGAAGAACTCTGTGGAGACCTGTGGGAAAGATCTCTTGTCCCTGTGAAAGAAGTGCTCAAGCATTCTGGTTTGAAGGTTGATGAGCTATATGCAGTAGAGCTGATAGGCGGTGCCACTCGCGTGCCAAAGTTACAGGCTAAGCTTCAGGAATTTCTTAGGAGGAAAGATCTGGATAAACATCTGGATGCTGATGAAGCTGTGGTACTTGGTGCAGCACTTCACGCTGCAAATTTAAGTGATGGAATCAAGTTGAATCGTAAGCTAGGAATGATTGATGGTTCTTCATATGGTTTTATGATCGAGTTAGATGGTCCTGATCTTTTGAATGATCAGAGCACTAAACAGTTACTAGTACAACGAATGAAGAAACTCCCCAGTAAGATGTTCAAGTCCATTAAGCATAATAAAGATTTTGAAGTTTCACTTACGTACGAGAGTGCAGATGCATTACCACCAGGGGTTTCATCTGATAAGTTTGCCCAGTATGCAGTGTCTGGTTTGACAGATGCTAGTGAGAAGTATTCATCTCGCAATCTCTCCTCTCCCATCAAGGCAAATCTGCATTTTTCTCTCAGCGGTAGCGGAATTCTTTCTCTTGATCGGGCAGATGCTGTTATCGAAATTTCAGAATGGGTGGAAGTTCCTAAAAAGAATTTGACTGTGGAGAATTCAACGACTGTTACTCCTACCATATCAGTTGAAGCTGGTCCAGGAAACACTTCAGAAGGGAGCAAAGGCAACACAGACACTGATGGTGGTATTAATAACACATCCAACTCCAATGTAGGAGTACAGAGTAGTGCGGATTTGGGCACAGAAAAGAAGCTGAAGAAGCGAACATTTAGGGTTCCACTGAAGATATTTGAGAGAACAGTGGGCCCTGGAATGTCTCTTTCAGAGGAAGCTCTGTCTGAAGCGAAACATAGATTGGAAGCTCTGGACAAGAAGGACGCAGAACGTAGAAAAACTGCAGAACTGAAAAATAACTTGGAAGGATACGTATATGCTACTAAAGAAAAGCTTGAATCGTCTGAGGAGATTGAGAAAATTTCACCTGAGCAGGAACGTCAATCCTTTACTGAGAAGCTTGATGAGGTACAAGAATGGCTGTATACTGACGGTGAGGATGCTCCTGTAACCAAATTCCAAGAACACCTTGATTTGTTAAAAGCTATAGGCGACCCAATATTTTTCAGATTGAATGAGCTTAACGCGCGGCCAGCGGCATCTGAGCATGCTCAAAAATATCTTGGCGAGCTTCAACAGATTATAAGTGGCTGGGAGGAGAGCAAATCTTGGCTTCCCAAAGTTAGAATAGATGAGGTTCTAAGTGATGCTGACAAGGTCAAGAATTGGTTGGAAGACAAGGAGGCTGAACAGAAGAAGAGTTCTGGATTTAGCACGCCGGTGTTCACGTCTGAAGAGGTCTATGGGAAGATATATGATCTTCAGGACAAGGTCGCGAGCGTCAATAGAATCCCTAAGCCAAAGCCAAAAGTTGAGAAGCCTCCAGAGAATGAAACTGAAAGTGGAGGAGAGAAGGCGAACACCTCCGACCCCACTTCTGAGAATTCCTCCCAAACTGACCAATCTGCAGAAGATCCTGTTTCATCCAATGACGAAGCGGATTCAGAAACTGAGGCTCACGATGAGTTGTGA | 2676 | 0.432 | MTIWFKVGLVILILSVISIQSESAVSSLDLGSEWLKVAVVNLKRGQSPISIAINEMSKRKSPALVAFQGGNRLIGEEAAGIIARYPDKVYSQVRDMIGKPFKYVKDLVESLYLPFDLVEDSRGMVGIRTDDGVTVYTVEELVAMILGYGRNLAEFHSKVPIKDVVITVPPYFGQAERKGLLQAAQLAGINVLSLMNEHSGAALQYGIDKDFSNQSRHVIFYDMGSSSTYAALAYFSAYNSREFGKTVSVNQFQVKDVRWDTELGGQTMDLRLVEYFADEFNNQVGNGVDVRKSPKAMAKLKKQVKRTKEILSANTMAPISVESLYDDRDFRSTITREKFEELCGDLWERSLVPVKEVLKHSGLKVDELYAVELIGGATRVPKLQAKLQEFLRRKDLDKHLDADEAVVLGAALHAANLSDGIKLNRKLGMIDGSSYGFMIELDGPDLLNDQSTKQLLVQRMKKLPSKMFKSIKHNKDFEVSLTYESADALPPGVSSDKFAQYAVSGLTDASEKYSSRNLSSPIKANLHFSLSGSGILSLDRADAVIEISEWVEVPKKNLTVENSTTVTPTISVEAGPGNTSEGSKGNTDTDGGINNTSNSNVGVQSSADLGTEKKLKKRTFRVPLKIFERTVGPGMSLSEEALSEAKHRLEALDKKDAERRKTAELKNNLEGYVYATKEKLESSEEIEKISPEQERQSFTEKLDEVQEWLYTDGEDAPVTKFQEHLDLLKAIGDPIFFRLNELNARPAASEHAQKYLGELQQIISGWEESKSWLPKVRIDEVLSDADKVKNWLEDKEAEQKKSSGFSTPVFTSEEVYGKIYDLQDKVASVNRIPKPKPKVEKPPENETESGGEKANTSDPTSENSSQTDQSAEDPVSSNDEADSETEAHDEL* | 892 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl13g01812 | 891 | CDD | HYOU1-like_NBD | 27 | 415 | - | - | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 827 | 891 | - | - | |
Eupl13g01812 | 891 | PANTHER | HSC70CB, ISOFORM G-RELATED | 23 | 868 | - | - | |
Eupl13g01812 | 891 | Gene3D | - | 28 | 415 | - | - | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 567 | 607 | - | - | |
Eupl13g01812 | 891 | PRINTS | 70kDa heat shock protein signature | 164 | 184 | - | - | |
Eupl13g01812 | 891 | PRINTS | 70kDa heat shock protein signature | 400 | 420 | - | - | |
Eupl13g01812 | 891 | PRINTS | 70kDa heat shock protein signature | 56 | 68 | - | - | |
Eupl13g01812 | 891 | PRINTS | 70kDa heat shock protein signature | 368 | 384 | - | - | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 567 | 608 | - | - | |
Eupl13g01812 | 891 | SUPERFAMILY | Actin-like ATPase domain | 215 | 417 | IPR043129 | - | |
Eupl13g01812 | 891 | FunFam | Heat shock 70 kDa protein 4 | 637 | 749 | - | - | |
Eupl13g01812 | 891 | FunFam | Heat shock 70 kDa protein 4 | 264 | 349 | - | - | |
Eupl13g01812 | 891 | Pfam | Hsp70 protein | 28 | 736 | IPR013126 | GO:0005524|GO:0140662 | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 834 | 848 | - | - | |
Eupl13g01812 | 891 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 425 | 567 | IPR029047 | - | |
Eupl13g01812 | 891 | Coils | Coil | 635 | 655 | - | - | |
Eupl13g01812 | 891 | Gene3D | - | 637 | 750 | IPR029048 | - | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 849 | 874 | - | - | |
Eupl13g01812 | 891 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 664 | 746 | IPR029048 | - | |
Eupl13g01812 | 891 | Gene3D | Actin; Chain A, domain 4 | 264 | 349 | - | - | |
Eupl13g01812 | 891 | Gene3D | - | 91 | 144 | - | - | |
Eupl13g01812 | 891 | SUPERFAMILY | Actin-like ATPase domain | 28 | 209 | IPR043129 | - | |
Eupl13g01812 | 891 | Gene3D | - | 210 | 397 | - | - | |
Eupl13g01812 | 891 | MobiDBLite | consensus disorder prediction | 875 | 891 | - | - | |
Eupl13g01812 | 891 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 371 | 385 | IPR018181 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl13g01812 | Eupl-Chr13 | 37711793 | 37738531 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl13g01812 | 20 | 542 | Calmodulin-binding Proteins | AT3G12580 | 28.302 | 2.15e-62 | 221 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl13g01812 | K09486 | - | ming:122093651 | 1405.96 |