Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01811 ATGGAGTTGTTGAGGAAGAAAAGAAAAGGAAGTGAGATTCAGGCGGGATCTGGTCTACCAGTGATTCTACCATCCAGTCGCAAATTACCATCGTCGTTGTCGATCATCGGGTCACACTTATCGTTGGAGGATTGCTCTCGGCGGAGGAAGAAATGCAAAGAACAGGCGGTCATGGAAGCCATTGGTTCTTGTAAAAGTAGACTGACTGGCATTGTTACTGCCCCTCCTTGTGTAAGTTCGTCGGATCCTCCTGGACGGGGTCTGAAGAGGAAGATAGGGTGCATTGATGCTGCCACTAAGATAGGCAGGAAGAAGAAGATTGAGCAGGAATACATTTTAGGAACTGAAATCGGGCAAGGTAAATTTGGGTCGGTTCGAGTCTGTAGGAGTAGGGCCAGTGGAGCAGAGTTTGCTTGCAAAACTTTGCGCAAGGGGGAGGAGACGGTTCATCGAGAAGTAGAGATAATGCAACACCTTTCTGGCCATCCTGGTGTAGTGACTCTGAAGGCAGTGTATGAGGATTCTGACTGTTTCCATCTCGTGATGGAGTTGTGCTCCGGTGGACGTTTGCTCGATCAGATGGTTAGGGAGGGACGGTATTCAGAGCATGGAGCTGCTAATATAATGAAGGAACTAATTTTGGTCATCAAGTATTGTCATGAAATGGGTGTGGTTCACCGAGACATAAAGCCTGAGAACATCCTTCTCACAACATCAGGCAAGATGAAGCTTGCGGACTTTGGGCTAGCCGCAAGGGTTTCAAATGGTCAGATCTTGTCTGGTGTGGCTGGGAGTCCGGCCTATGTTGCCCCAGAAGTTTTGGTAGGGAATTATTCGGAGAAGGTGGATATCTGGGGTGCCGGTGTTCTCCTTCATGCTCTCTTGGTTGGTGTCCTCCCGTTTCAGGGAGACTCATTAGAAGCGGTTTTTGAGGCAATCAAGAAGGTGAAGCTTGATTTCCACAGTGGGATATGGGAGTCTATATCTGTACCTGCTCGTGATCTGCTTGAGCGAATGCTGACAAGGGATGTTGCAGCCCGGATAACAGCAGATGAAGTACTAAGACATCCGTGGATTTTGCTGTACACGGAGCGGATGTTGAAGACACTAACCATCAAGTCAAAAGTGAGAAACCATGTAGGTGGGCCTTCCCGCCAACTCACCATCATACCCGGAGTGGAGTCAGAGAGAAATAGGGTCGCAAGTGGCTCTCTCAATGATGGCTTGGATCTGGTTTTGGCGTTTGATAGTTCAAGCCGTAAGTCAGAAGAGCAGGACGACTGTAGTTTTGTTGATGCACTTGCAGTGGCAATTTCACGCGTGAGGATATCCGAACCAAAGCGGAGCAGGCTCTGTGCCCCCACCAGCCCAATCCGACAGGAATGTTCTTCTAACATGAAGACTAACAATCTCTGTACAGCGTTCTGA 1428 0.4874 MELLRKKRKGSEIQAGSGLPVILPSSRKLPSSLSIIGSHLSLEDCSRRRKKCKEQAVMEAIGSCKSRLTGIVTAPPCVSSSDPPGRGLKRKIGCIDAATKIGRKKKIEQEYILGTEIGQGKFGSVRVCRSRASGAEFACKTLRKGEETVHREVEIMQHLSGHPGVVTLKAVYEDSDCFHLVMELCSGGRLLDQMVREGRYSEHGAANIMKELILVIKYCHEMGVVHRDIKPENILLTTSGKMKLADFGLAARVSNGQILSGVAGSPAYVAPEVLVGNYSEKVDIWGAGVLLHALLVGVLPFQGDSLEAVFEAIKKVKLDFHSGIWESISVPARDLLERMLTRDVAARITADEVLRHPWILLYTERMLKTLTIKSKVRNHVGGPSRQLTIIPGVESERNRVASGSLNDGLDLVLAFDSSSRKSEEQDDCSFVDALAVAISRVRISEPKRSRLCAPTSPIRQECSSNMKTNNLCTAF* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01811 475 CDD STKc_CAMK 111 358 - -
Eupl13g01811 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Eupl13g01811 475 Pfam Protein kinase domain 113 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01811 475 SMART serkin_6 111 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01811 475 ProSiteProfiles Protein kinase domain profile. 111 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01811 475 PANTHER SERINE/THREONINE-PROTEIN KINASE 98 371 - -
Eupl13g01811 475 ProSitePatterns Protein kinases ATP-binding region signature. 117 140 IPR017441 GO:0005524
Eupl13g01811 475 Gene3D Transferase(Phosphotransferase) domain 1 102 389 - -
Eupl13g01811 475 SUPERFAMILY Protein kinase-like (PK-like) 104 372 IPR011009 -
Eupl13g01811 475 FunFam Serine/threonine-protein kinase PEPKR2 102 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01811 Eupl-Chr13 37703499 37708851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01811 96 359 EF-hand Containing Proteins AT4G04720 44.364 2.28e-80 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl13g01811 Pkinase 2.3e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01811 - - nnu:104604022 728.013