Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01780 ATGGCGTCGACCGCAGTAGCACCATCCCCTCGCGAGGAGTACGTCTACATGGCGAAACTGGCCGAGCAGGCCGAACGATACGAGGAGATGGTTGAGTTCATGGAGAAGGTCACGGCCGCGGAGGCGGAGGAGCTCACAGTCGAGGAGCGTAACCTCCTCTCCGTTGCCTACAAGAACGTCATCGGTGCACGCCGTGCATCCTGGCGCATCATATCCTCGATCGAGCAGAAGGAGGAGAGCCGTGGCAACGAGGACCACGTGGCGACCATCCGCGACTACAGATCTAAGATCGAGTCGGAGCTCTCGTCGATCTGCGATGGTATCCTGCGCCTCCTTGACTCCAGGCTCATCCCCTCTGCCTCCTCTGGGGACTCTAAGGTCTTCTATCTGAAGATGAAGGGCGATTATCATCGTTACCTCGCCGAGTTCAAGACTGGCGCGGAACGGAAAGAAGCCGCCGAGAGCACCCTCTCTGCTTATAAATCGGCGCAGGAAATTGCGATTGCGGAGCTTGCTCCAACGCATCCTATCCGCCTAGGACTGGCTCTTAACTTCTCTGTGTTTTATTATGAGATCTTGAATTCTCCTGATCGAGCTTGTAATCTTGCAAAACAGGCATTTGATGAAGCGATCGCTGAGCTGGATACCCTAGGAGAGGAGTCATACAAGGATAGCACTTTGATAATGCAGCTCCTTCGCGATAACCTCACTTTGTGGACCTCCGACATGCAGGATGATGGGGCAGACGAGATCAAAGAAGCACCAAAGCGCGAGGACGAACAGTAG 786 0.5471 MASTAVAPSPREEYVYMAKLAEQAERYEEMVEFMEKVTAAEAEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVATIRDYRSKIESELSSICDGILRLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLSAYKSAQEIAIAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKREDEQ* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01780 261 PIRSF 14-3-3 6 252 IPR000308 -
Eupl13g01780 261 SMART 1433_4 11 253 IPR023410 -
Eupl13g01780 261 Gene3D - 2 253 IPR036815 -
Eupl13g01780 261 Coils Coil 17 37 - -
Eupl13g01780 261 ProSitePatterns 14-3-3 proteins signature 2. 222 241 IPR023409 -
Eupl13g01780 261 SUPERFAMILY 14-3-3 protein 10 242 IPR036815 -
Eupl13g01780 261 ProSitePatterns 14-3-3 proteins signature 1. 50 60 IPR023409 -
Eupl13g01780 261 PANTHER 14-3-3 PROTEIN 11 244 IPR000308 -
Eupl13g01780 261 Pfam 14-3-3 protein 17 240 IPR023410 -
Eupl13g01780 261 FunFam 14-3-3 protein epsilon 8 253 - -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 44 73 IPR000308 -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 213 242 IPR000308 -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 124 146 IPR000308 -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 159 185 IPR000308 -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 186 212 IPR000308 -
Eupl13g01780 261 PRINTS 14-3-3 protein zeta signature 93 117 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01780 Eupl-Chr13 37189997 37200964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01780 9 261 14-3-3 family AT1G78300 89.062 1.83e-167 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01780 K06630 - ming:122061905 483.026