Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01777 ATGGAGATCTCTCCATCATCCCAGTTGGAGCTGAAAGATCGCAGACCAGAAGCCCTTGGAGACTTCCGAGTTTTCCCTGACGAACTCATCTGTACTATCTTGGAGAATCTCACCCCTCGCGACGTCGCTCGCCTTTCTTGCGTTAGCAGTGTAATGTACATACTGTGCAACGAAGAACCACTGTGGATGACTCTATGCCTTAAGAGCGTCACCGGTCAGCTTGAATTCAAAGGGTCCTGGAAAAAGACTGCATTGTACCAACAACATCTACCCAGAGAATTTGTTGAGTCTTGCGGAAAACCTCTGCACTTTGATGGATTCAACTCTTTATTTCTATACAAAAGGTTCTACAGGTGTTTTACCACATTGGATGCATTCTCTTCGGACAAAGGAGATTTGGAAAGAAAGAAAGACCTCTCTCTGGAGGAGTTTCATCATGAGTATGATGGGCAGAAGCCGGTTTTGCTTACTGCATTGGCTGAAACTTGGCCAGCAAGACGTACTTGGAATACTGACCAACTATTGCACAACTATGGAGATACAGCATTCAAGATCTCTCAAAGGAATACCAGGAAAATCACTATGAAATTCAAGGATTACATTTCATACACAACACTTCAGCATGATGAAGACCCTCTATACATTTTTGATGATAAGTTTGGGGAAGTTGCGCCAGGTTTGCTGAAAGATTACAGTGTGCCTCATCTGTTTCATGAAGACTTTTTTGATGTCTTGGATAGAGATCAAAGGCCACCTTTTAGATGGCTAATTATTGGGCCAGAGAGGTCAGGTGCGTCTTGGCATGTTGATCCAGCTCTTACCAGTGCCTGGAACACCCTTCTTTGTGGACGGAAAAGGTGGGCATTGTACCCTCCGGGTAGAGTACCTTTAGGCGTTACAGTTCATGTAAATGAAGACGATGGTGATGTCAATGTTGAGAGTCCATCATCTCTGCAGTGGTGGCTAGATATTTATCCGCTGCTTGCAGACCAAGACAAACCAATAGAGTGTACTCAGCTACCTGGAGAGACGATATTTGTCCCGAGTGGGTGGTGGCATTGTGTACTAAATCTGGAAACCACGATTGCTGTTACTCAGAACTTTGTAAATTCAAAAAATTTTGAATTTTTATGTCTGGATATGGCTCCTGGTCATCGTCATAAAGGAGTTTGCCGTGCTGGATTGCTTGCTATTGATGAAGGAGGTTTTGAAAATGCCAAAAAGAATGCATACTGTGACGAAGATCAGTTGAATTTCTCAGACTTGACCAGGAAAGAGAAAAGGCTTAGAATTTGCAAACCTGAGGAAGACCCTCATGTTGATGACGTTGATGATAATGCTACAAATGGTGCCTCAAAAAGTTATAATAATTTGCAGAATCAGACTTACACTTATGACATAGATTTCTTATCCATGTTTTTAGAGGAAGATAGAGACCACTACAATTCTGTGTGGAGCCCAAGTAATTGCATAGGACAAAGAGAAATGAGACAATGGTTACACAAGCTTTGGGTTGGAAAACCAGGGATGAGAGACTTACTATGGAAGGGAGCTTGTCTAGCACTAAATGTGGACAAATGGTCAGCGTGCATGACAGAAATTTGTGCTTTCCATAATTTGCCTTCCCCCTTGGATGATGAGAGGCTTCCTGTTGGCACAGGTAGCAATCCTGTTTATCTCACTGCTGACCGTGTAATTAAGATATATGTTGAAGGGGGGTTGGAATCTTCTATGTATGGTTTGGGCACTGAGCTTGAGTTCTACAGTCTACTTAATAAAGTCAACTCCCCTCTGAAAGATCACATTCCTGATGTTTTGGCAAGTGGAATTCTTTTCCATGAGAATGGATCTTATAGAATTGTGCCATGGGATGGCAAAGGAGCCCCAGATGTAATTGCTAAGTGCAATCTGATACCGGGAGAGTGTGCCGGAGATGGTTTCCTCTTTGGTGTATGGAGCAAGAAAGAATTTGACTGTAGAAAAGCTGGAATGCCAACAAATGAATCACCCAGTTCTGTTGGATGCACAAGGATATGGCCGTATATAATAACTAAACGATGCAAAGGAGATATATTTGCTCATTTAAGAGATACGTTATCGTGGGATGATGTCCTAAATCTAGCTTCGTTTTTGGGAGAGCAACTGCGTAATCTTCATCTCTTGCCCCTGCCATCTTTGCATGATTTCACGTGTTCTGATAACAAACGGAATATGGATTTTAAGACGCCTTTGGTGAATGGGTTTGCGGAAGCGGTTACCAAGAGTTTTAGTATTCCAGTAGGATGGGAACTTTTTATTGAAACTATGACCAGGAGGAAGAAGGATGTCTCAAGCCGCTTGGCTAAATGGGGGGATCCAATTCCAAGCAGCCTGATAGAAAAAGTTGAAAAGTACATTCCAGATGATCTTGCAATGTTGCTCAACATGTTTGAGGATGAAAATGGACTGTATAAGGTTTGTAAGTCTTCCACCTGGATACACTCGGATATTATGGATGACAATATTCACATGGAACCATGTTCTCTTAGTCCTTGCTCAGATGAGAAGGCCCCAGATGCTAGCTTGATAGTTAATGATTCAGTGAATGGCTATGGCGGCCGCAGAGAGCAGAGGAAATGGCATCCTAGCCACATTCTTGACTTCAGTGACCTGTCTATAGGCGATCCTTTATGCGACTTACTTCCTATACATCTGGATGTCTTTAGAGGAGATCCACATCTGCTTAAGCGGTTTCTAGAAAGCTACAGACTTCCCTTGGTGAGAAGAATGCTACCGCATGAACCTGTAGAGAGGGAGGATAAGTTTGGACGACTCTCCTACCATGCCATGTGCTATTGTATTTTGCACGAGGATAATGTCCTGGGAGCTATCTTCAGTCTATGGAAGGAACTTAGGACGGCCAAATCATGGGAAGAAGTTGAAGAAGCTGTGTGGGGAGAATTGAACAAATATGAAGGTTCTGTTGGTCTTCAAAGTCACAGCCTCGATCCATGCAATTGGGAGATCGCGCCAAACACTTAG 3021 0.4307 MEISPSSQLELKDRRPEALGDFRVFPDELICTILENLTPRDVARLSCVSSVMYILCNEEPLWMTLCLKSVTGQLEFKGSWKKTALYQQHLPREFVESCGKPLHFDGFNSLFLYKRFYRCFTTLDAFSSDKGDLERKKDLSLEEFHHEYDGQKPVLLTALAETWPARRTWNTDQLLHNYGDTAFKISQRNTRKITMKFKDYISYTTLQHDEDPLYIFDDKFGEVAPGLLKDYSVPHLFHEDFFDVLDRDQRPPFRWLIIGPERSGASWHVDPALTSAWNTLLCGRKRWALYPPGRVPLGVTVHVNEDDGDVNVESPSSLQWWLDIYPLLADQDKPIECTQLPGETIFVPSGWWHCVLNLETTIAVTQNFVNSKNFEFLCLDMAPGHRHKGVCRAGLLAIDEGGFENAKKNAYCDEDQLNFSDLTRKEKRLRICKPEEDPHVDDVDDNATNGASKSYNNLQNQTYTYDIDFLSMFLEEDRDHYNSVWSPSNCIGQREMRQWLHKLWVGKPGMRDLLWKGACLALNVDKWSACMTEICAFHNLPSPLDDERLPVGTGSNPVYLTADRVIKIYVEGGLESSMYGLGTELEFYSLLNKVNSPLKDHIPDVLASGILFHENGSYRIVPWDGKGAPDVIAKCNLIPGECAGDGFLFGVWSKKEFDCRKAGMPTNESPSSVGCTRIWPYIITKRCKGDIFAHLRDTLSWDDVLNLASFLGEQLRNLHLLPLPSLHDFTCSDNKRNMDFKTPLVNGFAEAVTKSFSIPVGWELFIETMTRRKKDVSSRLAKWGDPIPSSLIEKVEKYIPDDLAMLLNMFEDENGLYKVCKSSTWIHSDIMDDNIHMEPCSLSPCSDEKAPDASLIVNDSVNGYGGRREQRKWHPSHILDFSDLSIGDPLCDLLPIHLDVFRGDPHLLKRFLESYRLPLVRRMLPHEPVEREDKFGRLSYHAMCYCILHEDNVLGAIFSLWKELRTAKSWEEVEEAVWGELNKYEGSVGLQSHSLDPCNWEIAPNT* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01777 1006 SMART fbox_2 25 65 IPR001810 GO:0005515
Eupl13g01777 1006 SUPERFAMILY Clavaminate synthase-like 132 376 - -
Eupl13g01777 1006 SUPERFAMILY Protein kinase-like (PK-like) 679 918 IPR011009 -
Eupl13g01777 1006 FunFam F-box protein At1g78280 113 370 - -
Eupl13g01777 1006 SMART cupin_9 213 386 IPR003347 -
Eupl13g01777 1006 Pfam F-box-like 26 68 IPR001810 GO:0005515
Eupl13g01777 1006 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Eupl13g01777 1006 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 19 596 - -
Eupl13g01777 1006 CDD F-box_SF 25 57 - -
Eupl13g01777 1006 Gene3D Cupin 120 370 - -
Eupl13g01777 1006 ProSiteProfiles JmjC domain profile. 222 385 IPR003347 -
Eupl13g01777 1006 Pfam Cupin-like domain 150 371 IPR041667 -
Eupl13g01777 1006 SUPERFAMILY F-box domain 18 81 IPR036047 GO:0005515
Eupl13g01777 1006 Gene3D - 16 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01777 Eupl-Chr13 37150538 37164558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01777 7 984 Glycosyltransferase AT1G78280 59.229 0.0 1187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl13g01777 Cupin_8 1.2e-20 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01777 - - nnu:104608655 1536.55