Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01761 ATGGATACCGAATCGTTTACTGACTTTTCGGATAATATAACCGAAAACTCGCTCGAGCCCCTACCCTTACTTAGCTGCTTGCTTCGCTCGCCCGCATCACCAGTCGAAGAAAATCATGAGACAAGCAATGAAGATGGTGTTGGTGTCACCTTAGCGTTATATATCGGCCTTCCTAATTGTTTGAATGACCCCACGACGTCAAACAAGGAGAAAGTCGACCGGAACGTAGTGTCCACCCGATATTGGATACCGACTCCGACGCAGATACTCATTGGCTTCACCCAATTCTCCTGTTATGTCTGCAAAGCAACCTTCAATCGCTACAACAACTTGCAGATGCACATGTGGGCGCATGGGTCGGAATATCGTAAAGGGATTGAGCCATTGAAGGGTGCACAGCCTAGAGCCATGTTAAGTATCCCTTGCTATTGTTGTGAAGAAGGGTGCAAGAACAATATCGATCATCCTCGAGCGAAGCCGCTTAAAGATTTCCGAACATTGCAAACTCATTACAAGAGGAAGCATGGGATGAAACCGTTTATGTGTCGAAAGTGTGGGAAGTTCTTGGCTGTAAAAGGCGATTGGCGAACGCATGAGAAGAATTGCGGGAAGCTTTGGCTCTGCGTATGCGGTTCGGACTTCAAGCATAAGAGATCGCTTAAGGATCACATTAGAGCATTTGGTTCAGGTCATGGTCCTTTTCCTGCTTTAATTGATGGCATGGAAGAGGTATATTAG 738 0.4634 MDTESFTDFSDNITENSLEPLPLLSCLLRSPASPVEENHETSNEDGVGVTLALYIGLPNCLNDPTTSNKEKVDRNVVSTRYWIPTPTQILIGFTQFSCYVCKATFNRYNNLQMHMWAHGSEYRKGIEPLKGAQPRAMLSIPCYCCEEGCKNNIDHPRAKPLKDFRTLQTHYKRKHGMKPFMCRKCGKFLAVKGDWRTHEKNCGKLWLCVCGSDFKHKRSLKDHIRAFGSGHGPFPALIDGMEEVY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01761 245 FunFam Zinc finger protein WIP2 149 231 - -
Eupl13g01761 245 ProSiteProfiles Zinc finger C2H2 type domain profile. 96 123 IPR013087 -
Eupl13g01761 245 SUPERFAMILY beta-beta-alpha zinc fingers 91 119 IPR036236 -
Eupl13g01761 245 ProSitePatterns Zinc finger C2H2 type domain signature. 98 118 IPR013087 -
Eupl13g01761 245 PANTHER ZINC FINGER PROTEIN WIP2 18 234 IPR043584 GO:0003700|GO:0010468
Eupl13g01761 245 SUPERFAMILY beta-beta-alpha zinc fingers 165 200 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01761 Eupl-Chr13 36879397 36880224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01761 8 236 C2H2 Transcription Factor Family AT1G34790 59.770 8.79e-102 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl13g01761 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01761 - - csin:114317915 365.155