Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01759 ATGGCCATTATACCTTGTGGAAGTACATGGGTAGCGCAGTGGGGAGTTCGACCCCAATTTATGTTAAGATCCTCCGTTGCAAAAAAGTTGCTGACATCCCGATATGGTGTTTCAAGCAAGATAGAATGTTTGGCATCACCAAGTTCAAGTATATTTTCCCAGGATTCCTTGTGTGCACTGTTTAATACGGGTTCATCTCAAAATCCACATCGCCGTAGAGGAGAACGGCTTATTGTTAGAGCTGATAGTGATTTCTATTCTACCCTTGGAGTGTCAAAAAATGCCAGTAAATCTGAAATAAAGAGTGCTTATCGGAAGCTTGCTAGGAGCTATCATCCAGATGTAAACAAAGATCCTGGAGCAGAACAGAAATTTAAGGACATTAGCAACGCCTACGAGGTCTTGTCTGATGATGAGAAACGATCCTTGTATGACAAGTATGGAGAGGCTGGGATTAAAGGCGCTGGTATGGGCATGGGGGATTTCAGCAACCCTTTTGATCTCTTTGAGTCGTTGTTTGAGGGCATGGGCGGTATGGGCGGCATGGGCATGGGTGGAGGCAGAGGTTCTAGAAATAGAGCAGTGGATGGTGCCGATGAGATTTACAATCTCGTATTGAATTTCAAGGAAGCGGTTTTCGGGGTGGAAAAAGAGATTGAGATAACCCGGCTGGAGAGCTGTAGCACCTGCAATGGGTCAGGTGCCAAACCAGGGACTAGTCCATCCAAATGTACTACGTGTGGGGGACAAGGCCAGGTCATCTCATCGGCAAGGACCCCGTTGGGCGTCTTCCAGCAAGTAATGACCTGTTCAGCTTGCGGTGGGACTGGGGAGTTATCCACTCCATGCAACACGTGTGGTGGGGATGGGCGAGTGAGGAGGACGAAGCGTATCAGTCTGAAAGTTCCTGCAGGTGTGGACTCTGGTAGCCGCTTGAGGGTCCGATCAGAAGGTAGTGCTGGAAGGAGAGGTGGGGCCCCTGGAGACCTATTTGTTATCATCGACGTTATCCCGGACCCTGTACTGAAACGTGATGACACCAACATACTCTACACCGGCAAGGTGTCATACATTGACGCCATCTTAGGTACAACAATAAAGGTTCCAACAGTGGACGGTATGGTCGATTTGAAGATCCCAGCTGGTACCCAGCCGGGCACGACTCTGGTGATGGCAAAGAAAGGTGTGCCTCTCCTCAATAAAAACAACATGAGGGGCGATCAATTGGTACGAGTGCAAGTCGAGATCCCAAAAAGGTTGAGCGGCGAAGAGAGGAAGCTGATCGAAGAGCTTGCCAGCCTGAACAAGACCAAGACTGCAAACAGCAGAAGATAG 1335 0.4899 MAIIPCGSTWVAQWGVRPQFMLRSSVAKKLLTSRYGVSSKIECLASPSSSIFSQDSLCALFNTGSSQNPHRRRGERLIVRADSDFYSTLGVSKNASKSEIKSAYRKLARSYHPDVNKDPGAEQKFKDISNAYEVLSDDEKRSLYDKYGEAGIKGAGMGMGDFSNPFDLFESLFEGMGGMGGMGMGGGRGSRNRAVDGADEIYNLVLNFKEAVFGVEKEIEITRLESCSTCNGSGAKPGTSPSKCTTCGGQGQVISSARTPLGVFQQVMTCSACGGTGELSTPCNTCGGDGRVRRTKRISLKVPAGVDSGSRLRVRSEGSAGRRGGAPGDLFVIIDVIPDPVLKRDDTNILYTGKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPGTTLVMAKKGVPLLNKNNMRGDQLVRVQVEIPKRLSGEERKLIEELASLNKTKTANSRR* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01759 444 Gene3D DnaJ domain 81 184 IPR036869 -
Eupl13g01759 444 CDD DnaJ 84 137 IPR001623 -
Eupl13g01759 444 FunFam Molecular chaperone DnaJ 219 295 - -
Eupl13g01759 444 PRINTS DnaJ domain signature 86 104 IPR001623 -
Eupl13g01759 444 PRINTS DnaJ domain signature 104 119 IPR001623 -
Eupl13g01759 444 PRINTS DnaJ domain signature 120 140 IPR001623 -
Eupl13g01759 444 PRINTS DnaJ domain signature 140 159 IPR001623 -
Eupl13g01759 444 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Eupl13g01759 444 CDD DnaJ_zf 227 290 IPR001305 GO:0031072|GO:0051082
Eupl13g01759 444 FunFam Putative Mitochondrial DnaJ chaperone 284 332 - -
Eupl13g01759 444 NCBIfam molecular chaperone DnaJ 84 433 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl13g01759 444 Gene3D - 227 290 - -
Eupl13g01759 444 CDD DnaJ_C 198 420 - -
Eupl13g01759 444 SUPERFAMILY Chaperone J-domain 81 188 IPR036869 -
Eupl13g01759 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 342 428 IPR008971 GO:0006457|GO:0051082
Eupl13g01759 444 ProSiteProfiles Zinc finger CR-type profile. 214 295 IPR001305 GO:0031072|GO:0051082
Eupl13g01759 444 Gene3D - 337 444 - -
Eupl13g01759 444 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 52 441 - -
Eupl13g01759 444 Pfam DnaJ central domain 227 290 IPR001305 GO:0031072|GO:0051082
Eupl13g01759 444 Hamap Chaperone protein DnaJ [dnaJ]. 81 440 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl13g01759 444 FunFam Chaperone protein dnaJ 1, mitochondrial 337 444 - -
Eupl13g01759 444 ProSiteProfiles dnaJ domain profile. 84 148 IPR001623 -
Eupl13g01759 444 Pfam DnaJ domain 84 145 IPR001623 -
Eupl13g01759 444 Pfam DnaJ C terminal domain 202 417 IPR002939 -
Eupl13g01759 444 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 350 IPR008971 GO:0006457|GO:0051082
Eupl13g01759 444 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 214 293 IPR036410 -
Eupl13g01759 444 FunFam Chaperone protein dnaJ A6 chloroplastic 81 184 - -
Eupl13g01759 444 SMART dnaj_3 83 140 IPR001623 -
Eupl13g01759 444 Gene3D - 197 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01759 Eupl-Chr13 36832061 36863459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01759 26 145 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.952 1.29e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01759 K03686 - nnu:104604682 748.429