Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01748 ATGTCAGCAAAGATGGGGCTGGTTTATGCAGTTCTGATGTTGGTTTCTATTCGTTCTTTTGTGGCATCTGATTATCAAGGGGATGCACTGTACGCGTTGAGGACTTCACTGAATGCTTCTCGCACTCAGCTCGCAGATTGGAACCAATTTCAAGTTAATCCATGCACTTGGTCAAATGTTATTTGTGACTCCTACTATAATGTCATTTCTGTAACATTGTCATCCATGGGATTTTCTGGATTCTTGTCACCTAAAATTGGAGTTCTGAGGACTCTTTCCACCCTTACGTTGCAAGGTAACGGCATAACTGGTGAGATACCAAAGGAGTTTGGAAATTTGATAAATCTGACAACCTTGGATTTGGAAAAGAACCGTTTGAGTGGAGAAATACCATCATCGCTTGGCAATCTTAAGAAGCTTCAATTCTTGATTTTGAGTCAAAACAAACTGAGTGGAAGTATTCCCGAATCAATTACAAATCTTCCACACTTGATCAATCTACAGCTAGCTTCCAATGATCTCAGCGGTCAAGTACCTGATCGTTTGTTTCAAGTTTCAAAATACAATTTTACAGGAAACACCTTGAATTGTGGTATAAATTTTTCACACCGTTGTGCGTCTGATACTAATGATACAGGTACTTCCCATAAATCAGAGCTTGGAATTGTATTTGGAATTGTTGGAGGAATAGTGGGGCTCCTCCTTTTAGGAGGTGTGTTTTTTTTTGTGTGGAAGGGCAGGCATAAAGGCTACATGCGTGAAGTTTTCGTAGATGTTGCAGGCGAAGATGACCGAAGAATTCAATTTGGGCAATTGAAAAGATTTGCATGGCGAGAGCTACAACTGGCTACTGATTGCTTCAGTGAGAAAAATGTTCTTGGACAGGGAGGTTTTGGAAAGGTATATAAAGGAGTGCTTGCAGATAATACAAAAATTGCTGTAAAACGACTGACTGATTATGAAAGTCCTGGTGGAGAGCAAGCATTCTTACGTGAAGTTGAGATGATAAGTGTGGCAGTTCACAGGAACCTTTTAAGGCTGATTGGGTACTGTACAACACCATCAGAACGACTATTGGTTTATCCTTTCATGCAGAACCTAAGTGTTGCCTATCGTCTTAGAGAAATTAAACCTGGGGAGCCGGTGTTAGATTGGTCTACTAGAAAGCGAGTGGCTATAGGCACAGCTCGTGGACTAGAATACCTTCATGAACATTGCAATCCCAAGATTATTCATCGTGATGTCAAGGCTGCCAATGTATTACTAGATGAAGATTTTGAAGCTGTTGTCGGGGACTTTGGCTTGGCAAAATTGGTAGATGTAAGAAAAACTAATGTGACAACTCAAGTTCGTGGGACTATGGGCCACATTGCACCTGAATATCTATCAACTGGAAAGTCATCAGAGAGGACTGATGTTTTTGGCTACGGGATTATGCTATTGGAAATTGTAACAGGACAACGTGCAATAGACTTTTCACGGTTGGAGGAAGAAGATGACGTGTTATTGCTTGACCATGTGAAGAAGCTGGAAAGGGAAAGAAGATTAGATGCAATTGTTGACCGGAACCTAAGTAGGAATTACAACAGCCAAGAGGTGGAGATGATGATCAAAGTTGCATTGCTCTGTACTCAAGCATCGCCAGAGGACCGTCCTACTATGTCGGAAGTGGTACGGATGCTGGAAGGGGAGGGGTTGGCCGAGAGGTGGGAAGAGTGGCAGCAAGTCGAAGTTACTCGTAGGCAAGAGTATGAGAGACTGCAGAGGAGATTTGATTGGGGTGAGGATTCGCTGTATAACCAGGATGCAATCGAATTGTCTGGTGGAAGATGA 1833 0.4228 MSAKMGLVYAVLMLVSIRSFVASDYQGDALYALRTSLNASRTQLADWNQFQVNPCTWSNVICDSYYNVISVTLSSMGFSGFLSPKIGVLRTLSTLTLQGNGITGEIPKEFGNLINLTTLDLEKNRLSGEIPSSLGNLKKLQFLILSQNKLSGSIPESITNLPHLINLQLASNDLSGQVPDRLFQVSKYNFTGNTLNCGINFSHRCASDTNDTGTSHKSELGIVFGIVGGIVGLLLLGGVFFFVWKGRHKGYMREVFVDVAGEDDRRIQFGQLKRFAWRELQLATDCFSEKNVLGQGGFGKVYKGVLADNTKIAVKRLTDYESPGGEQAFLREVEMISVAVHRNLLRLIGYCTTPSERLLVYPFMQNLSVAYRLREIKPGEPVLDWSTRKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLEIVTGQRAIDFSRLEEEDDVLLLDHVKKLERERRLDAIVDRNLSRNYNSQEVEMMIKVALLCTQASPEDRPTMSEVVRMLEGEGLAERWEEWQQVEVTRRQEYERLQRRFDWGEDSLYNQDAIELSGGR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01748 610 Gene3D Transferase(Phosphotransferase) domain 1 364 581 - -
Eupl13g01748 610 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 572 - -
Eupl13g01748 610 FunFam Somatic embryogenesis receptor kinase 1 256 363 - -
Eupl13g01748 610 Gene3D Phosphorylase Kinase; domain 1 256 363 - -
Eupl13g01748 610 ProSiteProfiles Protein kinase domain profile. 287 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01748 610 SUPERFAMILY L domain-like 26 195 - -
Eupl13g01748 610 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Eupl13g01748 610 ProSitePatterns Protein kinases ATP-binding region signature. 293 315 IPR017441 GO:0005524
Eupl13g01748 610 Gene3D Ribonuclease Inhibitor 23 207 IPR032675 -
Eupl13g01748 610 Pfam Protein kinase domain 288 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01748 610 FunFam Somatic embryogenesis receptor-like kinase 1 364 581 - -
Eupl13g01748 610 SUPERFAMILY Protein kinase-like (PK-like) 268 562 IPR011009 -
Eupl13g01748 610 FunFam Putative LRR receptor-like serine/threonine-protein kinase 23 207 - -
Eupl13g01748 610 Pfam Leucine rich repeat 90 150 IPR001611 GO:0005515
Eupl13g01748 610 SMART serkin_6 287 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01748 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01748 Eupl-Chr13 36614490 36632990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01748 4 610 Receptor kinase-like Gene Family AT5G10290 75.947 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl13g01748 Pkinase 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01748 - - nnu:104604787 1004.97