Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01744 ATGGATAAATATTGCTGCTTTAATGTCTGTGCTCAGCTTGTAGGAGGACATTCCTCATGTGGCTCCGGGAAGGGGAGGAACCATCAGGGTCTAATCAAGTATGGATTCAACCTAGTAAAAGGGAAAGCAAATCATCCCATGGAGGATTATCATGTCGCTAAGTTCGTACAGATCAACGGACACGAGCTTGGACTGTTTGCTATATACGATGGCCATTTGGGAGACAGTGTGCCTGCCTACCTACAAAAGCATTTGTTTTCCAATATCCTAAAGGAGGAAGAGTTTTGGACTGATCCCAGCAGATCTATTTCAAAGGCGTATGAGAGGACTGACGAGGCAATTCTTTCCCACAGTCCTGACTTGGGACGAGGTGGGTCAACTGCCGTTACTGCCATTCTTATAAATGGTCAAAAGTTATGGGTAGCCAATGTTGGAGATTCACGGGGAGTTCTTTCAAGAGGAGGGCTGGCAATACAGATGACTATTGATCATGAGCCCAACACCGAGCGTGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGGAGATGTCCCTAGAGTGAACGGCCAGTTGGCAGTTTCTCGTGCTTTCGGAGACAAGAGCCTTAAATCGCACTTACGATCAGATCCCGACGTACAAAATGCAGATATCAATTTTGATGTCGAGCTTCTCATTCTTGCAAGCGACGGTCTGTGGAAGGTCATGGGTAATCAAGAGGCAGTTGATATCGCTAGAAAGATCAAGGACCCACAGAGGGCAGCTAAGCAATTAACTTCTGAAGCATTGAACAGAGAGAGTAAAGACGATATATCTTGTGTCGTCGTTCGATTTAGGGGGTAA 849 0.4617 MDKYCCFNVCAQLVGGHSSCGSGKGRNHQGLIKYGFNLVKGKANHPMEDYHVAKFVQINGHELGLFAIYDGHLGDSVPAYLQKHLFSNILKEEEFWTDPSRSISKAYERTDEAILSHSPDLGRGGSTAVTAILINGQKLWVANVGDSRGVLSRGGLAIQMTIDHEPNTERGSIENRGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNADINFDVELLILASDGLWKVMGNQEAVDIARKIKDPQRAAKQLTSEALNRESKDDISCVVVRFRG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01744 282 CDD PP2Cc 32 280 IPR001932 -
Eupl13g01744 282 SMART PP2C_4 29 278 IPR001932 -
Eupl13g01744 282 SMART PP2C_SIG_2 44 280 IPR001932 -
Eupl13g01744 282 ProSiteProfiles PPM-type phosphatase domain profile. 33 280 IPR001932 -
Eupl13g01744 282 PANTHER PROTEIN PHOSPHATASE 33 280 IPR015655 GO:0004722|GO:0006470
Eupl13g01744 282 FunFam Probable protein phosphatase 2C 39 23 281 - -
Eupl13g01744 282 SUPERFAMILY PP2C-like 31 281 IPR036457 -
Eupl13g01744 282 Gene3D - 28 282 IPR036457 -
Eupl13g01744 282 Pfam Protein phosphatase 2C 42 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01744 Eupl-Chr13 36543055 36566386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01744 1 281 PP2C-type Phosphatase Gene Family AT1G22280 73.171 4.18e-156 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01744 K17506 - nnu:104604815 507.679