Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01742 ATGAAAACTCCTGCAACATTCTTCTCCTTTCAACGCTCACTATTGCTTCTAATTACAGTAAATTTATCTTCTTTATTGGTTGCTAATGAGCTCGGTTCTTCCTATCCCGGTTGCTGCGAAAGATGCGGCGACATAGATATCAGTTACCCATTTGGAATCGGAGACGGGTGTTTCTTCCCCGGCTTCGAAGTCACTTGCAATCAAAGTATTCCCTTCTTGACAAGATCAAACCTTCAACTCGTCGAGATTTTTCAAGGAGAAGTGCGTGTACCCTCGAACAAGTTCATTGCCACTGCTTGTTATCCATACAATTTGACAGGATCGTTCCAGGCAATTCAATTGCTCCCAGAGAGCCCTTACACCATTTCAATCGACTCAAACAGATTTGTAGTTGTTGGGTGCAATGCTGTGGGAATGATTACAGACAGTTCTAGTTCGGTTAATACATGCAAGACAATATGTCACACAAGTAAGATCATGGGTAGCGATTCTTGCACCGGAGACGGTTGTTGTCATACCCCCATTCCTCATCAGACACAGAAGTTACTAACAATTTTTACCAATTCGGTCGACGAGAATTCATCGATTCTCAGTCCTTGCAATTACGGGTTTGTTATCGAAGAAGGAATTAGATACCCCAATACCTTGGAACTGAACCACGCTGCAAATATTACAATGAAGCTTGAATGGGCTATAGGGGAAGGACATTGTAACGAAGCGAGGGACAAGAATGTCTCTATATGTGGAAAAAACAGCTACTGTGATGAATCAGATAGACATTCCGGCTATCTCTGCAAATGTTTATCAGGGTTCGAGGGGAACCCTTATCTCAACGGCTCTCGAGGATGCCAAGCTATCAATGGTTGCCACAATACAACATCTGATCCTTGTGTGCCTGAAGCTACTTGCCACGACACGAACCCAGGGCATTTTTGTACGTGTCCCGAAGGTACTGTAGGAGATGGTTCTAAAGGCTGCCGCAAGCGCTATCAAGTGATCCACCTGGTCCTAGCTACCATGTTAAGCATTGTACTCATTATATCTTGTTTCTCTTGGATCTACTGGACTCAAAAGAAAAGACATCTTGCCAAGATAAGAATGGAATACTTCCGGAAAAATGGGGGCCTCTTGCTACAACAACATTTCTCTTCTAGCAAAGGCACTACTACCAAACACATCAAGATCTTCTCTGCCCAAGAGTTGGAGAAGGCGACCGACAACTACGATAGCAGCAGAGTTCTAGGCTGTGGTGGCCAAGGCACTGTCTATAAAGGTATCCTCAATGATGGCTCCGCAGTCGCCATCAAGAAGTCCCAATCCGTGGCCGAGTGCCAAGTTAATCAGTTCATAAATGAGCTTGTTATTCTAAGCCAAATCAACCATAGAAACATTGTTAAGCTCATTGGTTGTTGCTTGGAGACCCAAGTTCCTATGTTGGTTTATGAATTCATCCCAGGAGGTACTTTATACCAAAAACTCCATGGAGACTTGGACCACTCAATCCAATTATGGTGGAAGGATCGCCTAAGAGTAGCTATTGAAGTTGGGGAGGCTCTTTCTTACTTGCACTCTTATGCTTCCATGCCCATATTCCATAGAGACATCAAGTCATCAAATGTACTCTTGGATGAGAATAACACTGCCAAACTTGCAGATTTTGGAGTTTCTAGGCTCGTTCCGCTCGACAAAAATCAAGTCTCGACTGTTGTACAAGGAACTATAGGGTACTTGGACCCAGAATACTTTAACACGGGGAAGTTAACTGAAAAGAGCGATGTTTACAGCTTTGGAGTGGTCTTGCTCGAGCTTTTAACAGGGAGGAAGCCTGTTAGACATGAGGAAACGCGAGACTACAGTAGCCTCGTGATGCATTTTCAGTCTTACATAGGCAACGAGAACTTGTTGGAGATCTTAGATGAAGGGATATTGGAGGAGAGGAAAATGGAGGAATTGAAAGCTGTTGCTGGGATTGCTAGTAGATGTTTGAAAGTGTTTGGAGCAGAGAGACCAACAATGAAGAAGGTGGTGCAAGAGCTTGCCTCAATCATTAGTGAGACCCTAGGATCACCCCTTTCTTCCAACATGCTTCAAAAAGAAGAATCAGCCATGAAAACTCCTGTAACATTCTTCACCATTCAACACTTACTATTGCTTCTAATTACAGTAAATTTATCTTCTTTATTAGTTGCAAATGAGCTTGGGTCTTCCTTTCCCGGTTGCCCCGAAAGATGCGGCGACATAGGTATCAGTTACCCATTTGGAATCGGAGACGACAGGTGTTTCTTCCCGGGATTCGAAGTCACTTGCAATCAAAGCATTCCCTTCTTGACAGGATCAAACCTTCAACTTGTTGAGATCTTCCAAGGAGAAGTGCGTGTCACCTCGAACACATTCATAGCCACTGCTTGTTATCCATACACTTATGAAGGAACGACGCAGGAGATTGCATTGCCCCCAGAGAGCCCTTTCACCTTTTCAATCAACTCAAACAGATTTGTAGTTGTTGGGTGCAATGCTATGGGAATGATAACAGACAGTTCTGATTGGATTAATACATGCAATACAATATGTCATACAAGTGAGATCATGGATAGCGATTCTTGCACCGGAGAAGGTTGTTGTCAAACCCCCCTTCCTCCCCTGAAAAATCAGTCGCTAACAATTTTTACCAATTCATTTGACAAGAATTCAAAGATTGTAACTCCTTGCGTATATGGGTTTGTTGTCGAAGAAGGAAGATACTCCAATGCCTGGGGCCTGAACCAAACTGCAAATATTACTGTGAAGCTTGAATGGACTATAGGGGAAAGGCATTGTAACGAAGCGAGGGACGGGAATGTCTCTATATGTGGAGAATATAGCTACTGTGACGACTCAGATGGACATTCCGGCTATCTCTGCAAATGTATATTAGGGTTCGAGGGGAACCCTTATCTCAACGGCTCTCAAGGATGCCAAGCTGTGAATGGTTGCCACAACACAACATCTGATCCTTGTGTGCCCGAAGCTACTTGCCTCGACACAAACCCAGGGCATATTTGTACGTGCCCCGAAGGTACTGTAGGTGATGGTTTTAAGAGGGGTAACGGCTGCCGCAAGCGCTTTCAAGTGATCTACCTGGTCCTAGCTACCATGTTAAGCATTGTACTCATTATATCTTGTTTCTCTTGGATCTACTGGACTCAAAAGAAAAGACACCTTGCCAAGATAAGAATGGAATACTTCCGGAAAAATGGAGGCCTCTTGCTACAACAACATTTCTCTTCTAGCAAAGGCACTACTACCAAACACATCAAGATCTTCTCTGCCCAAGAGTTGGAGAAGGTAACCGACAACTACGATGGCAGCAGAGTTCTAGGCTATGGTGGCCAAGGCACTGTCTATAAAGGTATCCTCAATGATGGCTCCGCAGTCGCCATCAAGAAGTCCCAATCCGTGGCCGAGTGCCAAGTCAATCAGTTCATAAATGAGCTTGTTATTCTAAGCCAAATCAACCATAGAAACATTGTTAAGCTCATTGGTTGTTGCTTGGAGACCCAAGTTCCTATGTTGGTTTATGAATTCATCCCAGGAGGTACTTTATACCAAAAAATCCACGGAGATTTGGACCACTCAATCCAATTATGGTGGAAGGATCGCCTAAGAGTAGCTATTGAAGTTGGGGAGGCTCTTTCTTACTTGCACTCTTATGCTTCCATGCCCATATTCCATAGAGACATCAAGTCATCCAATGTACTCTTAGATGAGAATAACACTGCCAAACTTGCAGATTTTGGAGTTTCTAGGCTCGTTCCGCTCGACAAAAATCAAGTCTCGACTGTTGTACAAGGAACTATAGGGTACTTGGACCCAGAATACTTCAACACGGGGAAGTTAACTGAAAAGAGTGATGTTTACAGCTTTGGAGTGGTCTTGCTTGAGCTTTTAACAGGGAGAAAGGCTGTTCGACATGAGGAAAGTCGGGACTACAGTAGCCTTGTGATACATTTTCAGTCTTACATAGGTAACGAGAACTTGTTGGAGATCTTAGATGAAAGGATATTGGAGGAGAGGAAAATGGAGGAAGTGAAAGCTGTTGCTGGGATTGCTAGTAGATGTCTGAAAGTGTTTGGAGCAGAGAGACCAACAATGAAGAAGGTGGCGCAAGAGCTTGTCTCAATCGCAAGCAAGACCCCAGGATCCCCCCTTTCTTCCAGCATGCTTCAAAGTTCCAACTCGAATCCTCTTATCAATCCTTCAATAGTTTAG 4248 0.4386 MKTPATFFSFQRSLLLLITVNLSSLLVANELGSSYPGCCERCGDIDISYPFGIGDGCFFPGFEVTCNQSIPFLTRSNLQLVEIFQGEVRVPSNKFIATACYPYNLTGSFQAIQLLPESPYTISIDSNRFVVVGCNAVGMITDSSSSVNTCKTICHTSKIMGSDSCTGDGCCHTPIPHQTQKLLTIFTNSVDENSSILSPCNYGFVIEEGIRYPNTLELNHAANITMKLEWAIGEGHCNEARDKNVSICGKNSYCDESDRHSGYLCKCLSGFEGNPYLNGSRGCQAINGCHNTTSDPCVPEATCHDTNPGHFCTCPEGTVGDGSKGCRKRYQVIHLVLATMLSIVLIISCFSWIYWTQKKRHLAKIRMEYFRKNGGLLLQQHFSSSKGTTTKHIKIFSAQELEKATDNYDSSRVLGCGGQGTVYKGILNDGSAVAIKKSQSVAECQVNQFINELVILSQINHRNIVKLIGCCLETQVPMLVYEFIPGGTLYQKLHGDLDHSIQLWWKDRLRVAIEVGEALSYLHSYASMPIFHRDIKSSNVLLDENNTAKLADFGVSRLVPLDKNQVSTVVQGTIGYLDPEYFNTGKLTEKSDVYSFGVVLLELLTGRKPVRHEETRDYSSLVMHFQSYIGNENLLEILDEGILEERKMEELKAVAGIASRCLKVFGAERPTMKKVVQELASIISETLGSPLSSNMLQKEESAMKTPVTFFTIQHLLLLLITVNLSSLLVANELGSSFPGCPERCGDIGISYPFGIGDDRCFFPGFEVTCNQSIPFLTGSNLQLVEIFQGEVRVTSNTFIATACYPYTYEGTTQEIALPPESPFTFSINSNRFVVVGCNAMGMITDSSDWINTCNTICHTSEIMDSDSCTGEGCCQTPLPPLKNQSLTIFTNSFDKNSKIVTPCVYGFVVEEGRYSNAWGLNQTANITVKLEWTIGERHCNEARDGNVSICGEYSYCDDSDGHSGYLCKCILGFEGNPYLNGSQGCQAVNGCHNTTSDPCVPEATCLDTNPGHICTCPEGTVGDGFKRGNGCRKRFQVIYLVLATMLSIVLIISCFSWIYWTQKKRHLAKIRMEYFRKNGGLLLQQHFSSSKGTTTKHIKIFSAQELEKVTDNYDGSRVLGYGGQGTVYKGILNDGSAVAIKKSQSVAECQVNQFINELVILSQINHRNIVKLIGCCLETQVPMLVYEFIPGGTLYQKIHGDLDHSIQLWWKDRLRVAIEVGEALSYLHSYASMPIFHRDIKSSNVLLDENNTAKLADFGVSRLVPLDKNQVSTVVQGTIGYLDPEYFNTGKLTEKSDVYSFGVVLLELLTGRKAVRHEESRDYSSLVIHFQSYIGNENLLEILDERILEERKMEEVKAVAGIASRCLKVFGAERPTMKKVAQELVSIASKTPGSPLSSSMLQSSNSNPLINPSIV* 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01742 1415 MobiDBLite consensus disorder prediction 1391 1415 - -
Eupl13g01742 1415 CDD EGF 994 1024 - -
Eupl13g01742 1415 Gene3D Laminin 979 1027 - -
Eupl13g01742 1415 Pfam Protein kinase domain 1116 1382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01742 1415 ProSiteProfiles Protein kinase domain profile. 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01742 1415 FunFam Wall-associated receptor kinase 2 1082 1188 - -
Eupl13g01742 1415 FunFam Wall-associated receptor kinase 2 1189 1406 - -
Eupl13g01742 1415 SMART serkin_6 408 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01742 1415 SMART serkin_6 1113 1385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01742 1415 CDD STKc_IRAK 1119 1384 - -
Eupl13g01742 1415 Gene3D Laminin 234 333 - -
Eupl13g01742 1415 FunFam Wall-associated receptor kinase 2 377 483 - -
Eupl13g01742 1415 Gene3D Phosphorylase Kinase; domain 1 1084 1188 - -
Eupl13g01742 1415 Gene3D Phosphorylase Kinase; domain 1 379 483 - -
Eupl13g01742 1415 ProSiteProfiles Protein kinase domain profile. 1113 1385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01742 1415 Pfam Wall-associated receptor kinase galacturonan-binding 38 85 IPR025287 GO:0030247
Eupl13g01742 1415 Pfam Wall-associated receptor kinase galacturonan-binding 740 790 IPR025287 GO:0030247
Eupl13g01742 1415 ProSiteProfiles EGF-like domain profile. 987 1026 IPR000742 -
Eupl13g01742 1415 CDD EGF 292 323 - -
Eupl13g01742 1415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1235 1247 IPR008271 GO:0004672|GO:0006468
Eupl13g01742 1415 ProSiteProfiles EGF-like domain profile. 285 324 IPR000742 -
Eupl13g01742 1415 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Eupl13g01742 1415 FunFam Wall-associated receptor kinase 2 484 703 - -
Eupl13g01742 1415 SUPERFAMILY Protein kinase-like (PK-like) 389 679 IPR011009 -
Eupl13g01742 1415 Pfam Protein tyrosine and serine/threonine kinase 411 679 IPR001245 GO:0004672|GO:0006468
Eupl13g01742 1415 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 683 IPR045274 GO:0007166
Eupl13g01742 1415 Gene3D Transferase(Phosphotransferase) domain 1 1189 1397 - -
Eupl13g01742 1415 Gene3D Transferase(Phosphotransferase) domain 1 484 697 - -
Eupl13g01742 1415 SUPERFAMILY Growth factor receptor domain 248 876 IPR009030 -
Eupl13g01742 1415 SMART egf_5 938 986 IPR000742 -
Eupl13g01742 1415 SMART egf_5 236 284 IPR000742 -
Eupl13g01742 1415 SMART egf_5 288 327 IPR000742 -
Eupl13g01742 1415 SMART egf_5 990 1032 IPR000742 -
Eupl13g01742 1415 CDD STKc_IRAK 414 679 - -
Eupl13g01742 1415 SMART egfca_6 987 1032 IPR001881 GO:0005509
Eupl13g01742 1415 SMART egfca_6 285 327 IPR001881 GO:0005509
Eupl13g01742 1415 SUPERFAMILY Protein kinase-like (PK-like) 1094 1384 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01742 Eupl-Chr13 36502377 36509424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01742 38 686 Receptor kinase-like Gene Family AT1G21230 42.794 2.07e-164 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Eupl13g01742 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01742 - - msin:131223944 1089.33