Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01730 ATGGCGGAGAGTAGGCGTTACGGGTTGGGTAATCAATTAGATATTGAGCAGATACTCTTGGAAGCACAAAGTCGATGGTTGCGCCCTGCTGAAATTTGTGAAATACTCCGAAATCATCGAAAGTTTCATATTGCTCCAGAGCCTCCAAATAAGCCACCTAGCGGTTCACTTTTCCTTTTCGATAGGAAGGTGTTGAGATACTTCAGGAAGGATGGCCATAATTGGCGGAAGAAAAAAGATGGAAAGACGGTGAAGGAGGCTCATGAGAGGCTAAAGGCTGGAAGCGTTGATGTTTTACACTGCTACTATGCCCATGGAGAAGAGAACGAAAATTTTCAAAGACGCAGTTATTGGATGCTCGAAGAGGATTACATGCACATTGTTCTTGTCCACTATCGGGAAGTGAAGGGTAACAAAATAAGCTTTGGCCGCCCTAGAGATACTGAAGAAGTTATAACCAATTCCCAGATGAGCAGTCCTGTGTCTTCTAGTGTTCTTACAAATAATAATCAAGTACATTCACAAGCTACGGATACCACAAGCCTAAACAGTGCTCAGACATCAGAATATGAAGATGCTGAATCTGATAATCATCAAGCAAGTTCCAGATACCGTACTTTTCTTGAGTTGCAACAGTGTGAGGACAGGCCTGTGACGAGCGAGATGGATTCTAGCCTCTTAAACTCATATTTTCCAGTTTCCTGTCCAAGTAGCCAATATGATTATCAAGGAAAACAATCAGCTATTCCTGGACTGAATCTTGTTTCACTTTCTCAAGAAAATGGGGGTAGAGATGGAAATGATGCTGTGTTTGGGTTAAATTTTGAGCCCAGGAAACAGCTTGACTTGACATCCTGGGAAGAGGTCTTGGAAAATTGTACGCCGCAATTTCAGGGTGCACCTTTTAGACCATCAGTTTCATCGACACAACCTGATCTTGTGGGGATTATCCCCAAACAAGAAAATGTGATACTTGGGCAAGTTTTTACAGATGAGCTCAATATCAAGCAGGAGGTTGTGGATAGACCACAGGGCCAAGAAAAATGGCAGATTGACTCTGAAGATTCTTTACACATATCTAAATGGCCGATGGACCAGAAGTTGCATGGAGACTCAGCCTATGATCTAAGTACTAGGTTTCATGAGCAAAAAGTTAATTATATAGATTTTCATAATTCTCCTGAGCCTTTTTGTACACACCCTGAACAGCAAAATGGGCATCCTTTGCAAAATGACCTTCATATGCAGCTACCAAATGCAGAACTTGGATGTCTTTTGAAATCAAATTTAGAGGATGATCCGACCATGGGTGGAAATTTCAATTACTCTTCCCCTGCAAAACAGCCAATGTTAGACTCCTCTAGTATGGGAGGGTTGAAGAAACTTGATAGCTTCACCCGTTGGATGAGTAAAGAACTTGGGGAGGTAGATGGGTCACATATGCAGTCCAGTTCTGGGGTTTACTGGAATACTGTTGAAAGTGAAAGTGTTGTTGACGACTCCAGCATGTCCTCTCAAGTGCACTTGGATGCCTACTTGTTGAGTCCCTCACTCTCTCAGGACCAGCTTTTCAGCATTATTGATTTCTCACCAAACTGGGCGTATACAGACTCAGAAACTAAGGTTCTGATTACTGGAACATTCTTAAAGAGTCCACAAGATGTAGCAAAATGTAAATGGTCATGTATGTTTGGGGAAGTGGAGGTTCAAGCCGAGGTTTTAGCAGATGGTGTTCTTCGTTGCCATGCTCCAATGCACACAGCTGGGAGGGTCCCTTTTTATGTAACATGTTCCAACAGATTGGCTTGTAGTGAAGTGCGAGAATTTGAATTCCGAGTCAGCCATACTCGAGATTCTGACATGACAGATCTCTATAGAGGCAGTACAAGTGATATGCAGCTTCATATACGACTTGGAAAGTTATTATCTCTGGGATCTGTCAGTCACCCAAAGTCTATCTCCAGTAGTGTTGGTGAGAAACCTAATGTAAGCAGTAAAATCAGTTCTTTAATGAAAGAAGATGATGATGAATGGTTCCAGATGGTAAAGCTTACCTCAGAGGAGGAGTTTTCCCCAGGTAAAGTAAAGGAGCAGTTGCTTCAAAAGATACTGAAAGAGAAGTTGCATGCATGGCTTCTTCAGAAAGTAACTGAAGATGGTAAAGGTCCTAGCATATTAGATAAGGAGGGCCAAGGTGTGCTACATTTAGCAGCTGCTCTTGGTTATGATTGGGCCATAGCACCCACAATAGCTGCAGGTGTTACTATCAATTTCCGTGATGTGAATGGTTGGACTGCACTTCACTGGGCAGCATTTTGTGGCAGAGAGCGCACAGTTGCTGCCCTTGTCTCTCTTGGCGCAGCTCCTGGAGCATTAACAGATCCGACCCCCAAATTTCCTTCTGGTAGAACACCTGCAGACCTGGCTTCTGGCAATGGAAACAAAGGGATTGCTGGTTACCTGGCAGAATATTCCTTGACCACCCATCTTTCATCCCTTACTTTGAAGGATGCTAAGGATGGTGATGTTCCAGATATTTCCAGGGTGAAAGCTATACAAGCAGCAACGGAACGGATTGCCACACCTATTAGCGATGGTGGTGTGCCAGATGGGTCACTGAAGGATTCACTAACTGCTGTCTGTAATGCTACTCAAGCTGCTGCTCGTATTCATCAAGTCTTTAGGGTGCAATCATTCCAGAAAAAGCAGTTAGTTGAGTATGGTGATGATAAATTTGGAATGTCAGATGAGCGTGTTCTTTCACTCATATCTGTCAAGACACATAGGCCAGGACAACATGATGAACCTGTGCATACTGCTGCAATACGGATACAGAACAAGTTCCGTGGTTGGAAGGGGAGAAAAGAATTTTTGATAACGCGGCAACGAATTGTTAAGATTCAGGCTCATGTAAGGGGGCACCAGGTGAGGAAACATTACAAAAAGATCATCTGGTCAGTAGGAATTGTGGAGAAAGTGATTTTACGCTGGAGACGGAAAGGAAGCGGCTTCCGTGGGTTTCGACCAGAAACACTTATCGAGGGGCCTGGAACACAAAGCGGGCCCTCAAAAGAGGATGATTATGATTTCCTGAAAGAAGGCAGAAAACAGACAGAGGAAAGGTTGCAGAAGGCACTTGCTAGGGTGAAGTCCATGGTTCAGTATCCAGAAGCAAGAGATCAATACCGTAGGCTGCTGAATGTTGTTACTGAATTCCAGGAAACCAAGATTGTGTATGATAGGGTTCTAAACAGTTCAGACGAAGCAGGCGATTGTGATGATGACCTGATTGACCTCGAAGCACTGTTGGATGATGACACCTTTATGTCTACAGAATTTTGA 3342 0.4357 MAESRRYGLGNQLDIEQILLEAQSRWLRPAEICEILRNHRKFHIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEDYMHIVLVHYREVKGNKISFGRPRDTEEVITNSQMSSPVSSSVLTNNNQVHSQATDTTSLNSAQTSEYEDAESDNHQASSRYRTFLELQQCEDRPVTSEMDSSLLNSYFPVSCPSSQYDYQGKQSAIPGLNLVSLSQENGGRDGNDAVFGLNFEPRKQLDLTSWEEVLENCTPQFQGAPFRPSVSSTQPDLVGIIPKQENVILGQVFTDELNIKQEVVDRPQGQEKWQIDSEDSLHISKWPMDQKLHGDSAYDLSTRFHEQKVNYIDFHNSPEPFCTHPEQQNGHPLQNDLHMQLPNAELGCLLKSNLEDDPTMGGNFNYSSPAKQPMLDSSSMGGLKKLDSFTRWMSKELGEVDGSHMQSSSGVYWNTVESESVVDDSSMSSQVHLDAYLLSPSLSQDQLFSIIDFSPNWAYTDSETKVLITGTFLKSPQDVAKCKWSCMFGEVEVQAEVLADGVLRCHAPMHTAGRVPFYVTCSNRLACSEVREFEFRVSHTRDSDMTDLYRGSTSDMQLHIRLGKLLSLGSVSHPKSISSSVGEKPNVSSKISSLMKEDDDEWFQMVKLTSEEEFSPGKVKEQLLQKILKEKLHAWLLQKVTEDGKGPSILDKEGQGVLHLAAALGYDWAIAPTIAAGVTINFRDVNGWTALHWAAFCGRERTVAALVSLGAAPGALTDPTPKFPSGRTPADLASGNGNKGIAGYLAEYSLTTHLSSLTLKDAKDGDVPDISRVKAIQAATERIATPISDGGVPDGSLKDSLTAVCNATQAAARIHQVFRVQSFQKKQLVEYGDDKFGMSDERVLSLISVKTHRPGQHDEPVHTAAIRIQNKFRGWKGRKEFLITRQRIVKIQAHVRGHQVRKHYKKIIWSVGIVEKVILRWRRKGSGFRGFRPETLIEGPGTQSGPSKEDDYDFLKEGRKQTEERLQKALARVKSMVQYPEARDQYRRLLNVVTEFQETKIVYDRVLNSSDEAGDCDDDLIDLEALLDDDTFMSTEF* 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01730 1113 Gene3D Immunoglobulins 519 615 IPR013783 -
Eupl13g01730 1113 Pfam IQ calmodulin-binding motif 962 981 IPR000048 GO:0005515
Eupl13g01730 1113 Pfam IQ calmodulin-binding motif 939 957 IPR000048 GO:0005515
Eupl13g01730 1113 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Eupl13g01730 1113 SUPERFAMILY Ankyrin repeat 708 824 IPR036770 -
Eupl13g01730 1113 SMART ANK_2a 801 830 IPR002110 GO:0005515
Eupl13g01730 1113 SMART ANK_2a 762 791 IPR002110 GO:0005515
Eupl13g01730 1113 Gene3D - 687 834 IPR036770 -
Eupl13g01730 1113 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Eupl13g01730 1113 ProSiteProfiles IQ motif profile. 938 966 IPR000048 GO:0005515
Eupl13g01730 1113 MobiDBLite consensus disorder prediction 172 190 - -
Eupl13g01730 1113 ProSiteProfiles Ankyrin repeat profile. 762 794 IPR002110 GO:0005515
Eupl13g01730 1113 SMART iq_5 959 981 IPR000048 GO:0005515
Eupl13g01730 1113 SMART iq_5 936 958 IPR000048 GO:0005515
Eupl13g01730 1113 Pfam IPT/TIG domain 526 603 IPR002909 -
Eupl13g01730 1113 Coils Coil 1028 1048 - -
Eupl13g01730 1113 FunFam Calmodulin-binding transcription activator 2 936 984 - -
Eupl13g01730 1113 SUPERFAMILY E set domains 526 612 IPR014756 -
Eupl13g01730 1113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 987 IPR027417 -
Eupl13g01730 1113 ProSiteProfiles IQ motif profile. 960 984 IPR000048 GO:0005515
Eupl13g01730 1113 MobiDBLite consensus disorder prediction 1008 1027 - -
Eupl13g01730 1113 MobiDBLite consensus disorder prediction 172 198 - -
Eupl13g01730 1113 Gene3D - 936 984 - -
Eupl13g01730 1113 FunFam Calmodulin-binding transcription activator 2 519 615 - -
Eupl13g01730 1113 ProSiteProfiles Ankyrin repeat region circular profile. 762 787 - -
Eupl13g01730 1113 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 13 1075 - -
Eupl13g01730 1113 SMART CG_1_2 18 136 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01730 Eupl-Chr13 36349639 36378879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01730 1 1113 CAMTA Transcription Factor Family AT5G64220 50.801 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Eupl13g01730 CG-1 6e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01730 K21596 - nnu:104605988 1578.53