Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01729 ATGGCTGTAGCGGCCCCTGGGCAGCTCAACCTCGACGAGTCCCCCTCGTGGGGATCTCGAAGCGTCGATTGCTTCGAGAAATTGGAGCAGATCGGTGAAGGAACATACGGTCAAGTATACATGGCCAGAGAAATCAAAACCGGGGAAATTGTTGCCTTGAAAAAGATACGAATGGACAATGAAAGAGAAGGGTTCCCAATAACCGCAATACGCGAAATCAAAATTCTAAAGAAGCTGCATCATGAAAACATAATTAAGTTGAAAGAGATTGTGACTTCTCCAGGTCCTGAAAGGGATGAGCAAGGGAAGCTAGATGGTAATAAGTACAAAGGTAGCATATACATGGTTTTTGAATACATGGACCATGATTTGACGGGTCTTGCTGATCGACCTGGGATGCGATTTACGGTTCCCCAGATCAAGTGCTATATGAGGCAGCTACTGACAGGGCTTCATTACTGTCATGTCAATCAAGTACTACATCGCGATATCAAAGGCTCCAATCTTCTAATAGATAATGAGGGAAATCTGAAGCTTGCTGATTTTGGGCTTGCACGGTCATTCTCCAATGATCATAATGCCAATCTCACAAATCGTGTTATTACTTTGTGGTATAGACCTCCAGAGTTGCTGCTCGGAACCACGAAGTATGGTCCTGCTGTCGACATGTGGTCTGTTGGTTGTATTTTTGCAGAGCTTCTTCATGGAAAACCAATCTTGCCTGGAAAAAATGAGCCAGAGCAATTGAATAAGATTTTCGAGTTGTGTGGAGCTCCTGATGAGGTCATCTGGCCTGGGGTTTCCAAGATTCCTTGGTATAACAATTTCAAGCCAACAAGGCCAATGAAGAGACGTGTCAGGGAGGTTTTCAAACATTTTGATCGCCATGCTTTGGAGTTGCTGGAGAGAATGTTGACTCTTGATCCATCTCAGAGAATATCTGCTAAGGATGCACTTGATGCTGAATATTTCTGGAATGACCCCTTACCTTGTGATCCCAAGAGCTTACCTAAATACGAATCATCTCATGAGTTCCAGACAAAGAAAAAGCGCCAACAGCAGCGACAGCATGAAGAAACAGCAAAGCGACAGAAACTACAGCACCCACAGCAGCATGCACGCTTGCCTCCTATCCAACAGACTGGGCAAGCGCACCCTCAGCTCCGTCCAGGACCTAATCAGCCCATGCATAATTCCCAGCCTCCAGTGGTTGCAGGGCCAAGCCACCACTATGGAAAGCCTCGCGGACCTTCTGGAGGGCCAAACAGATACCCCCAGAGTGGAAACCCTAGTGGCGGATACAACCCAAGTCGTGGAGGTCAAGGCGGAGGTTACAGTGGTGGGCCATATCCACCACAAGGGAGGGGGCCTCCATATGCGGCTAGTGGTATGCCTGGTCCAGGTCCCAGAGGGGGTGGCAGTGGTTATGGAGTTGGTGCTCCAAATTATCCCCAGGGAGCCCCATATGGAGGTTCAGGTGCTGGTCGGGGTCCAAATATGATGGGTGGTAATCGCAATCAACAATATGGGGGTTGGCAGCAGTAA 1545 0.4809 MAVAAPGQLNLDESPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENIIKLKEIVTSPGPERDEQGKLDGNKYKGSIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSNDHNANLTNRVITLWYRPPELLLGTTKYGPAVDMWSVGCIFAELLHGKPILPGKNEPEQLNKIFELCGAPDEVIWPGVSKIPWYNNFKPTRPMKRRVREVFKHFDRHALELLERMLTLDPSQRISAKDALDAEYFWNDPLPCDPKSLPKYESSHEFQTKKKRQQQRQHEETAKRQKLQHPQQHARLPPIQQTGQAHPQLRPGPNQPMHNSQPPVVAGPSHHYGKPRGPSGGPNRYPQSGNPSGGYNPSRGGQGGGYSGGPYPPQGRGPPYAASGMPGPGPRGGGSGYGVGAPNYPQGAPYGGSGAGRGPNMMGGNRNQQYGGWQQ* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01729 514 FunFam Cyclin-dependent kinase C-2 12 121 - -
Eupl13g01729 514 MobiDBLite consensus disorder prediction 335 514 - -
Eupl13g01729 514 CDD STKc_CDK9_like 25 324 - -
Eupl13g01729 514 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Eupl13g01729 514 PANTHER CELL DIVISION PROTEIN KINASE 23 330 - -
Eupl13g01729 514 ProSiteProfiles Protein kinase domain profile. 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01729 514 SUPERFAMILY Protein kinase-like (PK-like) 19 332 IPR011009 -
Eupl13g01729 514 SMART serkin_6 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01729 514 MobiDBLite consensus disorder prediction 422 436 - -
Eupl13g01729 514 FunFam Cyclin-dependent kinase C-2 122 364 - -
Eupl13g01729 514 MobiDBLite consensus disorder prediction 337 366 - -
Eupl13g01729 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Eupl13g01729 514 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Eupl13g01729 514 Gene3D Transferase(Phosphotransferase) domain 1 122 364 - -
Eupl13g01729 514 MobiDBLite consensus disorder prediction 373 401 - -
Eupl13g01729 514 Pfam Protein kinase domain 25 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01729 Eupl-Chr13 36309741 36334807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01729 1 514 Core Cell Cycle Gene Families AT5G10270 79.423 0.0 799
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl13g01729 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01729 K08819 - msin:131233558 920.998