Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01721 ATGGGGTCGTCCATCTTAAACAAATTGTCCTCCCTCGTCTCTTTGGTCTTGCTGTTGTTGCTCATATTGCATCCTTCTTCCAATGTTATCGCTTCCAGTTCTGCTGTTACTAGTTTTGCAACTAAAGAAGAAGCGAAGGCTCTCTTGCAATGGAAAACCAACCTCCACAACCAAACCCATTCTCTCCTCCCTTCATGGACCAATTCTTCGTCCCACTGCATGTGGTTAGGAATTGCTTGCAACAAGGCTGGAAGTGTCACCAAAATAAACCTCACACGTTTGGGTTTGCAAGGTACGCTCCATAACTTCAACTTTTCTTGCTTTCCTAACCTCGTCGGTCTTGATCTAAGCGCCAATGCACTCTTTGAGAATATTCCAGCCCATATCAGTAACCTTTCAAAACTCACCTACCTAGATTTGTCGACCAATCATCTCTCTAGAAATATTCCATCAGAAATTGGCCTCTTGACAAGTCTACGTTTTCTGTCTCTCAGTCAAAATCAGCTTACAGGCTCAATTCCTCAAGAACTTGGAAATTTGTTGAATCTCAATTTGCTAGGCCTCTCTAGAAACCTTTTAACTAGTTTGGTCCATTCAACGTTGGGAAATTTAACCAAGTTGTCCGGTTTGTACCTCTGGAAAAATCAACTTTCTGGTTCCATTCCTCCTGCAATAGGAAACTTGAAATCTCTTAATGATTTACATCTAAGTAATAATAATCTCACTGGTTCAATCCCTGCTTCTTTAGGTAAGTTGAGCAACCTGACCACTCTATACCTCTTTGAGAATCAACTTTCTGGTCCCATTCCTCTAGAAATAGGAAATTCGAAAAATCTCTTTGAGCTAGTCTTGTCCACTAACAACCTAATTGGTTCTATCCCTTCCACTTTTGGAAACTTGAAGAAGCTTACCCACTTGTTTCTGTTCGAAAATCAGATATCTGGCTCCATACCTCTAGAAATAGGAAAATTACAATCTCTTATTGAGCTGGATTTGGACACCAACAATCTCATCGGTTCAATTCCTGCTTCTTTAGGTAATTTGAGCAACCTAACCACTCTATACCTCAATGACAATCAACTTTCTGGTTCCATTCCTCTAGAAATAGGAAATCTGAAGAATCTCGTTGAGCTAGCCTTGTCCACTAACAACCTAATTGGTTCTATCCCTTCCACTTTTGGAAACTTGAAGAAGCTTACCCTCTTGATTCTGTTCGAAAATCAGATATCTGGCTCCATACCTCTAGAAATAGGAAATTTGAAGTCTCTTATTGAACTGCAACTATACACTAACAATCTCACCGGTTCAATTCCTGCTTCTTTAGGTAATTTGAGATACCTAACCACTCTATACCTCTATAAGAATCAACTTTCTGGTTCCATTCCTCTAGAAATAGGAAATCTGAAGAATCTCGTTGAGCTAGCCTTGTCCACTAACAATCTAATTGGTTCCATCCCTTCTACTTTTGGGAACTTGAAGAAGCTCACAATCTTGACCCTGTTCGAAAATATGATATCTGGCTCCATACCTCCAGAAATAGGAAACTTGAAGTCTCTTAATGAGTTACAATTGTACACCAACACTCTCACTGGTTCAATCTCTTCTTCTTTAGGTAAGTTGAGCAACCTAGCCATTCTTCGTCTCTATGGCAACCAACTTTCTGGTTCCATTCCTCTAGAAATAGGAAATCTAAAAAATCTCATTGAGCTACATGTGGGTACTAATAATCTCATCGGTTCAATCCCTCCTTTAGGTAATTTGAGTAACCTAAAATTCCTACACCTTCATATGAATAAACTTTTCGGTTCCATTCATCAAGGAATAGGGAACTTGACGAATTTGGTTTCACTACAACTGAGTGAGAACATGTTCTCTGGTTATTTGCCACAACAGATATGCCAAGGTGGATCACTTGAATACTTAGCTGCAAACAACAACCATTTCATTGGTCCCATCCCAAAAAGCTTGAGAAATTGCACGAGCTTATTGAGAGTCCGATTAGAGAGAAATCAACTCACCGGGAATATATCAGAAAACTTTGGTTTATATCCAAATTTGGATTACATTGATTTGAGCCATAACAGATTGTATGGTGAGATTTCACGAAATTGGGGAGAGTACCAACATCTGACAAGCCTACGAATCTCTAACAATAAAATCACTGGTAAGATACCACCTGAGTTTGGACAATTGACTCAACTACGAAGAGTTGACCTTTCATCAAATCATATAGTAGGAGAGATTCCAAAAGAGATTGGGAAGTTGACTTATTTGCTAGATCTGAATTTAAGTGTTAATCACATCTCTGGTAATTTACCAGTAGAAATTGGAAGTTTATCTAGCATAATGACTCTAGACCTCTCAACCAACAATCTAAGTGGACCAATACCAATAGGAGTTTGTGACTGCTTGAACTTAGAATACTTGGATTTTAGTAACAACATGCTAAATGAAAGCATTCCATTTCAAATTGGTAATTTGATTTACTTACAGCCTTTATTGGATCTTAGTCAGAACAAACTCACTGGAAAGTTACCATCAGAATTTGGAAAGTTGCACAACTTAGAGAAGCTCAATCTCTCAAAAAATCTGTTCTCTGGTTCCATTCCATCTTCATTTAATGAAATGCTCAGTTTGACATCTATTGATATTTCTTATAATGAGTTGGAAGGTCCTCTTCCTACCAACAAAGCCTTTCAAGAAGCTTCAATAGAAGCTTTCAGAAACAACAAAGGATTATGTGGTAGTGTTAGAGGTTTGCATTCTTGCAATTATCCTATAATACAGAAAACTAATGGGAGAGGTCACAAAATCATGATTATCATCATACTTCCTCTTTTAGGAGCATTATTTCTTTTATTTGCATTTCTTGGAATTTCTTCCATTTTTTGTCGAAGAGAGAGAAATGTAGTACAAGAGGCAAGAGAAATGCACAATGAAGATCTATTTTGCATATGGAATTTTGATGGGAGAATAGTGTTTGAAGACATCATTGAAGTGACTGAGGATTTTGATGCCAAGCATTGCATTGGGTTGGGAAGATATGGAAGTGTTTATAAAGCAGAGCTGTCAACAGGTCAAGTAGTGGCTGTAAAGAAACTTAATCCATTAGAAGAAAGTGGCATGGTTGATGTAAAAATGTTTAAAAATGAGATACATGCATTAGCAGAAATACAACATCGAAACATTGTGAAACTATACGGTTTTTGTTCACATGCACGATACTCATTTTTAATTTACGAGTATTTTGAAAAGGGGAGCTTAGCTAAGATCCTAAGTGATATGAAAGAAGCAACCAAATTAGATTGGTTTAAGAGAGTAAACATTATTAAAGGTGTAGCCCATGCTATATCTTATATGCACCATGATTGCTCACTACCAATAATTCATCGAGACATCTCTAGCAACAACATTTTGTTAGATTCAGAATATGAGGCTCATGTCTCAGATTTTGGCACGGCAAAACATCTAAAGCGCGATTCATCCAACTGGACAGTACTTGCAGGCACATATGGATATATAGCACCAGAACTTGCTTATACAATGAAGGTGACTGAAAAATGTGATGTGTATAGCTTCGGGGTGGTAACACTAGAAGTATTAATGGGAAGACATCCAGGGGATTTCATCTCCTCAGTAACAACATCATCATCATCAATGGGACAAAATACTTTCTTAAAGGATGTATTGGATCAACGCCTCTCACCCCCTACCCTCCAAATCACTAATGAAGTGATTTCAATTGTAAAGCTGGCATTCGCATGCTTACATGCTACTCCACAATCTCGACCAACCATGCAACATGTGTCTCAAGAGTTGTCAACTTGCATGAGATCTTTTTCAAAGTCATTCTACACAATAACAATGGGACAACTGTTGAATCCTAATCTCTGA 3894 0.3796 MGSSILNKLSSLVSLVLLLLLILHPSSNVIASSSAVTSFATKEEAKALLQWKTNLHNQTHSLLPSWTNSSSHCMWLGIACNKAGSVTKINLTRLGLQGTLHNFNFSCFPNLVGLDLSANALFENIPAHISNLSKLTYLDLSTNHLSRNIPSEIGLLTSLRFLSLSQNQLTGSIPQELGNLLNLNLLGLSRNLLTSLVHSTLGNLTKLSGLYLWKNQLSGSIPPAIGNLKSLNDLHLSNNNLTGSIPASLGKLSNLTTLYLFENQLSGPIPLEIGNSKNLFELVLSTNNLIGSIPSTFGNLKKLTHLFLFENQISGSIPLEIGKLQSLIELDLDTNNLIGSIPASLGNLSNLTTLYLNDNQLSGSIPLEIGNLKNLVELALSTNNLIGSIPSTFGNLKKLTLLILFENQISGSIPLEIGNLKSLIELQLYTNNLTGSIPASLGNLRYLTTLYLYKNQLSGSIPLEIGNLKNLVELALSTNNLIGSIPSTFGNLKKLTILTLFENMISGSIPPEIGNLKSLNELQLYTNTLTGSISSSLGKLSNLAILRLYGNQLSGSIPLEIGNLKNLIELHVGTNNLIGSIPPLGNLSNLKFLHLHMNKLFGSIHQGIGNLTNLVSLQLSENMFSGYLPQQICQGGSLEYLAANNNHFIGPIPKSLRNCTSLLRVRLERNQLTGNISENFGLYPNLDYIDLSHNRLYGEISRNWGEYQHLTSLRISNNKITGKIPPEFGQLTQLRRVDLSSNHIVGEIPKEIGKLTYLLDLNLSVNHISGNLPVEIGSLSSIMTLDLSTNNLSGPIPIGVCDCLNLEYLDFSNNMLNESIPFQIGNLIYLQPLLDLSQNKLTGKLPSEFGKLHNLEKLNLSKNLFSGSIPSSFNEMLSLTSIDISYNELEGPLPTNKAFQEASIEAFRNNKGLCGSVRGLHSCNYPIIQKTNGRGHKIMIIIILPLLGALFLLFAFLGISSIFCRRERNVVQEAREMHNEDLFCIWNFDGRIVFEDIIEVTEDFDAKHCIGLGRYGSVYKAELSTGQVVAVKKLNPLEESGMVDVKMFKNEIHALAEIQHRNIVKLYGFCSHARYSFLIYEYFEKGSLAKILSDMKEATKLDWFKRVNIIKGVAHAISYMHHDCSLPIIHRDISSNNILLDSEYEAHVSDFGTAKHLKRDSSNWTVLAGTYGYIAPELAYTMKVTEKCDVYSFGVVTLEVLMGRHPGDFISSVTTSSSSMGQNTFLKDVLDQRLSPPTLQITNEVISIVKLAFACLHATPQSRPTMQHVSQELSTCMRSFSKSFYTITMGQLLNPNL* 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01721 1297 FunFam Leucine-rich repeat receptor protein kinase MSP1 966 1082 - -
Eupl13g01721 1297 ProSiteProfiles Leucine-rich repeat profile. 134 156 IPR001611 GO:0005515
Eupl13g01721 1297 Pfam Leucine Rich repeats (2 copies) 708 748 IPR025875 -
Eupl13g01721 1297 Gene3D Ribonuclease Inhibitor 376 478 IPR032675 -
Eupl13g01721 1297 Gene3D Ribonuclease Inhibitor 40 210 IPR032675 -
Eupl13g01721 1297 Pfam Protein kinase domain 1006 1271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01721 1297 SUPERFAMILY Protein kinase-like (PK-like) 987 1273 IPR011009 -
Eupl13g01721 1297 ProSiteProfiles Protein kinase domain profile. 1004 1285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01721 1297 FunFam Nuclear pore complex protein NUP107 41 197 - -
Eupl13g01721 1297 Pfam Leucine rich repeat 206 265 IPR001611 GO:0005515
Eupl13g01721 1297 Pfam Leucine rich repeat 109 169 IPR001611 GO:0005515
Eupl13g01721 1297 Pfam Leucine rich repeat 834 889 IPR001611 GO:0005515
Eupl13g01721 1297 SUPERFAMILY L domain-like 43 311 - -
Eupl13g01721 1297 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 295 389 - -
Eupl13g01721 1297 Gene3D Ribonuclease Inhibitor 479 583 IPR032675 -
Eupl13g01721 1297 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 612 926 - -
Eupl13g01721 1297 SMART LRR_typ_2 611 635 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 492 516 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 540 564 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 587 610 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 468 491 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 132 155 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 779 803 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 156 179 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 852 875 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 731 755 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 300 324 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 372 395 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 252 276 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 204 227 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 420 444 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 108 131 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 180 203 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 348 371 IPR003591 -
Eupl13g01721 1297 SMART LRR_typ_2 228 251 IPR003591 -
Eupl13g01721 1297 SMART LRR_sd22_2 348 369 - -
Eupl13g01721 1297 SMART LRR_sd22_2 803 822 - -
Eupl13g01721 1297 SMART LRR_sd22_2 108 127 - -
Eupl13g01721 1297 SMART LRR_sd22_2 444 465 - -
Eupl13g01721 1297 SMART LRR_sd22_2 132 151 - -
Eupl13g01721 1297 SMART LRR_sd22_2 156 182 - -
Eupl13g01721 1297 SMART LRR_sd22_2 300 321 - -
Eupl13g01721 1297 Gene3D Phosphorylase Kinase; domain 1 965 1082 - -
Eupl13g01721 1297 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1128 1140 IPR008266 GO:0004672|GO:0006468
Eupl13g01721 1297 FunFam MDIS1-interacting receptor like kinase 2 isoform A 486 584 - -
Eupl13g01721 1297 Gene3D Transferase(Phosphotransferase) domain 1 1083 1288 - -
Eupl13g01721 1297 SUPERFAMILY RNI-like 583 891 - -
Eupl13g01721 1297 ProSitePatterns Protein kinases ATP-binding region signature. 1010 1033 IPR017441 GO:0005524
Eupl13g01721 1297 FunFam MDIS1-interacting receptor like kinase 2 1083 1279 - -
Eupl13g01721 1297 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Eupl13g01721 1297 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 390 485 - -
Eupl13g01721 1297 Gene3D Ribonuclease Inhibitor 211 369 IPR032675 -
Eupl13g01721 1297 Gene3D Ribonuclease Inhibitor 584 925 IPR032675 -
Eupl13g01721 1297 FunFam MDIS1-interacting receptor like kinase 2 isoform A 198 294 - -
Eupl13g01721 1297 SUPERFAMILY RNI-like 245 579 - -
Eupl13g01721 1297 PANTHER LEUCINE RICH REPEAT KINASE 2 561 1284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01721 Eupl-Chr13 36056020 36067762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01721 17 684 Receptor kinase-like Gene Family AT4G08850 42.308 7.36e-133 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl13g01721 Pkinase 3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01721 - - msin:131230503 1351.27