Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01692 ATGAACCTCTGGATCTGCAAAAATCTCATTTCACTTTCACTCGCCCTCAAGACCGCTCGTCCGTATCTCTACAAAACCCATCTCGCCTTTTCCTGCCAACCCAATAAATCAAAATCTCTCGCCATCTCCGACTTCCTGATCAATCGACATGGATTCTCCTCAGAAACTGCTTCGAAGGCCTCCACTATTGTAACCCTTATTCGGAGTCCTGAAAATTCCGATTCAGTACTCGCATTCCTCGGCCAAAACGGTTTCTCAAAGAACCATCTCGAGAAACTTATCAAACTCTGCCCCAATGTTCTTTGTTGCAACCTCGACAAATCCATAAAGCCCAAAATCAAGGCATTTCAGGACTTAGGTTTCTCCCCAAATGATGTCGCTGACATAATTGCATCCAACCCATGGGCTCTGAGACGAAGCGCCGATAAACGGCTTATCCCCTCGATTATCATATTGAAGGATATCGTGGGTACGATTTCAGGTATCTCTAAGGTCCTCAAAGGTTCTTCGCGGTTCTTCCATCACGATTTACAGAAGACTGTAATCCCAAATATAGAATATTTGAAAAGCTTTGGAATTAGTGGATCCCAGATCATCACATATCTTATTCATTTCCCGAGATTCTTCATTCTTAAACCAGATACCATCAAGGCTTTGGTTGAGAGGGTTGAAGAATTGGGTTTTGATTGCAAGTCCAAGATGTTCCTTAATGCCATTCGGGTCTTGAGCTCAATGACTCGAGAGAATTGGGAACTCAAATTGGAGCTCTTTCGAAGTCTGGGGTGGTCAGAAGATGAGATCTTATCTGTGTTTAGGAAGCAACCGCAAGTGTTTGCCCTCTCGGATAGAAAAATTAGGGAAGGAGCAGCGTTCCTACTTAGCACAGGGAAGTACAACACCTCTTTCTTAGTTCGCCATCCGGAATTGCTTCTCTTCAGCTTAGAAGGAAGGATTAAACCCAGGATCCAGATTTTTGAGATTCTAGAGAGCAAGAATTTGCTTCCCAAAAGCATTAGTTTGACGACAATCTGCAAGACGTCGGAGAAGCAGTTTTTTCAAAAATATGTACTTCCCTATGCAAATGAAGTTGGAAATCTTTCCACATAG 1107 0.4309 MNLWICKNLISLSLALKTARPYLYKTHLAFSCQPNKSKSLAISDFLINRHGFSSETASKASTIVTLIRSPENSDSVLAFLGQNGFSKNHLEKLIKLCPNVLCCNLDKSIKPKIKAFQDLGFSPNDVADIIASNPWALRRSADKRLIPSIIILKDIVGTISGISKVLKGSSRFFHHDLQKTVIPNIEYLKSFGISGSQIITYLIHFPRFFILKPDTIKALVERVEELGFDCKSKMFLNAIRVLSSMTRENWELKLELFRSLGWSEDEILSVFRKQPQVFALSDRKIREGAAFLLSTGKYNTSFLVRHPELLLFSLEGRIKPRIQIFEILESKNLLPKSISLTTICKTSEKQFFQKYVLPYANEVGNLST* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01692 368 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 163 194 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 268 298 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 Pfam mTERF 165 351 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 Pfam mTERF 77 231 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 Gene3D Transcription termination factor 3, mitochondrial 141 363 IPR038538 -
Eupl13g01692 368 PANTHER CGI-12 PROTEIN-RELATED 37 359 IPR003690 GO:0003690|GO:0006355
Eupl13g01692 368 FunFam Mitochondrial transcription termination factor-like 141 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01692 Eupl-Chr13 35480967 35482557 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl13g01692 mTERF 9.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01692 K15031 K20729 vvi:104882482 407.912