Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01688 ATGACGAAGCAGAATGTGGTCGTTTCCGATCCGAAATCAGGGATTAACATGGCGATTACAGTCTCCATGTCGAAATCGTCTCTGTTTCCATCGTTAGAACATAAAGCACTGACTGCACCAGGTGGGTACATCACCATTTCCCGGAAAAAGTTTCTGAGGAAGCTTGAAACAGGGGGATGGGTTGATTCCATGAGAGCTTCATCTCCTACTCGTGTCAAATCTATGGCCTCTTTGTCTCCAATGGATGATCTACAGTCACGGATTCTGCGTCACCCATCAGCTTTGAGTATGTTCGAGCAGATCATGAATGCTTCAAAAGGGAAGCAAATCGTAATGTTTTTAGACTACGATGGAACCCTTTCACCCATCGTAGACGACCCAGATAGTGCTTTCATGTCCGAAGCGATGAGAGAAGCTGTAAGAAACGTGGCTAAATACTTTCCTACAGCTATTGTGAGCGGGAGGTGCAGAGACAAGGTGTATAGCTTTGTACAAATAGCAGAGCTGTACTATGCAGGAAGCCATGGCATGGATATTGAAGGACCAGCCAAAGGTCCCAAATGCAAGAAAGGTACTCAGCCTGTTCTCTTCCAACCAGCTAGTGAGTTCCTACCCATGATAGATGAGGTTTATAAGGCATTAATGGAGAAAACAAAATCCACCCCAGGAGCCTTGGTTGAAAATAACAAGTTCTGTGTATCTGTTCATTTTCGTCGTGTTGAAGAAAAGAGATGGGGTGCACTGGCAGAGCAAGTTAGATCAGTGCTCAAGGAATACCCAAAGCTTAGACTGACTCAAGGGAGGAAGGTACTAGAGATCCGTCCTACCATTAAATGGGACAAAGGGAAGGCCGTTGAATTTCTATTAGAGTCACTTGGATTCGCCAATTGTAACGATGTTTTGCCAGTGTACATAGGCGATGATCGGACCGATGAAGATGCATTCAAGGTTTTACGTGATAAAGGACAAGGGTTCGGTATTCTTGTTTCAAAAATTCCGAAGGAGACGAATGCGACTTATTCGCTTCAAGAACCATCAGAGGTTATGGACTTTTTGCATCGCTTGGTGGAGTGGAAACAAAGGTCTTAG 1089 0.4463 MTKQNVVVSDPKSGINMAITVSMSKSSLFPSLEHKALTAPGGYITISRKKFLRKLETGGWVDSMRASSPTRVKSMASLSPMDDLQSRILRHPSALSMFEQIMNASKGKQIVMFLDYDGTLSPIVDDPDSAFMSEAMREAVRNVAKYFPTAIVSGRCRDKVYSFVQIAELYYAGSHGMDIEGPAKGPKCKKGTQPVLFQPASEFLPMIDEVYKALMEKTKSTPGALVENNKFCVSVHFRRVEEKRWGALAEQVRSVLKEYPKLRLTQGRKVLEIRPTIKWDKGKAVEFLLESLGFANCNDVLPVYIGDDRTDEDAFKVLRDKGQGFGILVSKIPKETNATYSLQEPSEVMDFLHRLVEWKQRS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01688 362 NCBIfam trehalose-phosphatase 108 356 IPR003337 GO:0003824|GO:0005992
Eupl13g01688 362 Pfam Trehalose-phosphatase 113 346 IPR003337 GO:0003824|GO:0005992
Eupl13g01688 362 CDD HAD_TPP 111 349 - -
Eupl13g01688 362 FunFam Trehalose 6-phosphate phosphatase 206 362 - -
Eupl13g01688 362 Gene3D - 110 189 IPR023214 -
Eupl13g01688 362 Gene3D - 203 362 IPR023214 -
Eupl13g01688 362 FunFam Trehalose 6-phosphate phosphatase 110 196 - -
Eupl13g01688 362 NCBIfam HAD-IIB family hydrolase 112 321 IPR006379 -
Eupl13g01688 362 SUPERFAMILY HAD-like 111 358 IPR036412 -
Eupl13g01688 362 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 361 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01688 Eupl-Chr13 35437714 35440630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01688 101 362 Trehalose Biosynthesis Gene Families AT1G06410 25.614 8.27e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01688 K01087 - msin:131242256 568.926