Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01670 ATGGCAGTGGCTGCGACATCAGCTGCAGTAGTCAACAGCTTGGGTTCTTCCTTCTTGTCGGGCGAGAAGAGGAGTCACAGCTTGCTCTCGTCGAGCATCGGAGCTAGAGTCGGTACTGTCGTCGCTCCTCGCAGGCTTGTCGTTGTTGCTGCAGCTCCGAAGAAGTCTTGGATTCCTGGTGTTAGAGGAGGAGGCAACTTCATCGACCCCGAGTGGCTAGATGGCTCGCTCCCAGGGGACTACGGGTTCGACCCATTGGGTCTAGGTAAGGACCCAGCCTTCCTCAAGTGGTACAGAGAGGCTGAGCTAATCCATGGTCGATGGGCAATGGCAGCAGTGGTTGGCATCTTCGTCGGCCAGGCCTGGAGCGGCATACCATGGTTCGAGGCCGGTGCTGACCCTGGTGCAATTGCACCCTTCTCCTTTGGCTCTCTCTTAGGCACCCAACTCCTCCTAATGGGGTGGGTGGAGAGCAAAAGATGGGTCGACTTCTTCAATCCCGAGTCTCAGTCCGTGGAGTGGGCAACGCCATGGTCCAAAACAGCTGAGAATTTCGTGAATGCAACAGGCGAACAAGGTTACCCTGGTGGTAAATTCTTCGACCCATTGTCGTTTGCCGGTTCGATCAAGAATGGTGTGTACATCCCGGACGAGGAGAAGCTGGAGAGACTGAAGTTAGCCGAGATCAAGCATGCCCGCCTTGCCATGTTGGCCATGCTCATTTTCTACTTCGAGGCTGGGCAAGGAAAGACCCCCCTTGGGGCTCTCGGTTTGTAA 777 0.5573 MAVAATSAAVVNSLGSSFLSGEKRSHSLLSSSIGARVGTVVAPRRLVVVAAAPKKSWIPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKTAENFVNATGEQGYPGGKFFDPLSFAGSIKNGVYIPDEEKLERLKLAEIKHARLAMLAMLIFYFEAGQGKTPLGALGL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01670 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Eupl13g01670 258 Gene3D Chlorophyll a/b binding protein domain 70 257 - -
Eupl13g01670 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 65 256 IPR001344 GO:0009765|GO:0016020
Eupl13g01670 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
Eupl13g01670 258 SUPERFAMILY Chlorophyll a-b binding protein 69 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01670 Eupl-Chr13 35084226 35087478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01670 5 258 Chloroplast and Mitochondria Gene Families AT1G15820 79.377 6.58e-147 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01670 K08917 - csin:114319654 464.151