Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01666 ATGGAGATTTCTTTCCATTTGAATCCCAGAATAGGAAAGAAGCTTCCAATATTTTCTAAAAGAAGGACCTTATTACAGAAGCTTTGCAAGAGCAAAAGCGACATTATTTCATGTAGAGGTAACAGGTTGACCATGCAAAGAGGGAGCAAAAACTTCTATGAAGTTCTTTCTCTTGGCTCTGAGAATGTTGGTTTTGATGAGATAAAGAAAGCTTATAGAAGCATGGCTCTTCAATACCACCCTGATGTTTGTTCTCCTTCTAGAAAGGAAGAATCAACGACAAGGTTTGTCGAGCTTCGACGGGCTTATGAAACACTCTCCGATCCAGTTTCACGTAAAAAGTATGATTATGAACTGGGTTTGGGTGATTCAATGGTGCTTGATGTTGGGAGGATGCGAAGGGTCGACGGAGTGAGATCGAATTTTCCAAAGGAGGTTTGGGAAAACCAGCTCTGTGGACTAAAAAGGAGGTCTTGTGATCGAATGAAGAGGAAGAAAATGGGATACATGTAG 513 0.4094 MEISFHLNPRIGKKLPIFSKRRTLLQKLCKSKSDIISCRGNRLTMQRGSKNFYEVLSLGSENVGFDEIKKAYRSMALQYHPDVCSPSRKEESTTRFVELRRAYETLSDPVSRKKYDYELGLGDSMVLDVGRMRRVDGVRSNFPKEVWENQLCGLKRRSCDRMKRKKMGYM* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01666 170 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 18 168 - -
Eupl13g01666 170 ProSitePatterns Nt-dnaJ domain signature. 96 115 IPR018253 -
Eupl13g01666 170 PRINTS DnaJ domain signature 54 72 IPR001623 -
Eupl13g01666 170 PRINTS DnaJ domain signature 91 111 IPR001623 -
Eupl13g01666 170 PRINTS DnaJ domain signature 72 87 IPR001623 -
Eupl13g01666 170 SMART dnaj_3 50 111 IPR001623 -
Eupl13g01666 170 Gene3D DnaJ domain 39 134 IPR036869 -
Eupl13g01666 170 CDD DnaJ 51 108 IPR001623 -
Eupl13g01666 170 ProSiteProfiles dnaJ domain profile. 51 119 IPR001623 -
Eupl13g01666 170 SUPERFAMILY Chaperone J-domain 44 119 IPR036869 -
Eupl13g01666 170 Pfam DnaJ domain 51 116 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01666 Eupl-Chr13 35021804 35022316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01666 53 116 C2H2 Transcription Factor Family AT1G74250 46.269 2.57e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01666 - - csin:114320189 193.356