Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01654 ATGAAGATGGCTTTGAGGGACCGTGGTAGTATGGAGGATCCAGATGGGACATTGGCAAGTGTTGCCCAATGCATTGAGCAGTTGCGCCGAAATTCCTCAACTGTACAAGAGAAAGAGAGCTCGTTGAAGCAATTGCTGGACCTTATTGATACACGTGACAATGCTTTCAGTGCCGTCGGATCTCACTCTCAGGCTGTTCCAATACTTGTTTCTCTTCTTAGGTCAGGATCACTTGGAGTGAAGATGCATGCTGCTACAGTTTTAGGTTCTCTCTGTAAGGAGGACGAGTTAAGGGTAAAAGTCTTGTTGGGAGGTTGCATTCCTCCATTGCTTGGCCTTCTCAGGTCAAGCTCAACAGAAGGCCAAATTGCAGCTGCAAAGGCAATTTATGCCGTTTCTCAAGGTGGGGCTAGGGATCATGTCGGATCAAAGATCTTCTCAACTGAAGGAGTTGTGCCTGTGCTCTGGGAGCAGCTAGAAAATGGGCTCAAGGCTGGAAACTTGGTTGATAACCTATTAACTGGAGCTTTGAGAAACCTATCTAGCAGCACTGAGGGATTTTGGTTTGCCACAATTGAAGCAGGAGGAGTGGATATACTTGTGAAGTTGCTCACAACTGGAAATTCTAGTACTCAAGCAAATGTTTGCTTTCTCCTTGCATGTATGATGATGGAGGATGCATCTGTTTGTTCCCGGGTCTTAGCTGCAGAAGCTACTAAACAACTCCTCAAGCTACTGGGATCTGGTAATGAAGCCCCTGTCAGAGCAGAAGCTGCAGGTGCTCTTAAATCTCTTTCTGCCCAGTGCAAAGAAGCAAGGCGGGAGATAGCTAGTTCTAATGGGATACCTGCTTTGATAAATGCGACAATAGCTCCATCAAAGGAATTCATGCAAGGTGAGTATGCCCAAGCATTGCAGGAGAATGCAATGTGTGCTCTGGCGAATATCTCTGGTGGCTTATCGTATGTCATCTCAAGCCTTGGTGAAAGCCTTGACTCATGTACTTCACCTGCTCAGATTGCTGACACACTGGGGGCTTTAGCTTCAGCTCTTATGATATATGAAAGCAAAGCAGAATCAATCAGAGCATCAGATCCTCTGATTGTTGAGCAGATATTGGTTAAGCAGTTTAAACCTCGATTACCATTTCTTGTGCAGGAGCGTACCATAGAGGCCCTAGCCAGCTTGTATGGGAATGCTATTCTGTCAAGGAAACTTACAAATTCTGATGCAAAACGTCTGCTTGTTGGTTTGGTCACAATGGCAACTAATGAGGTTCAGGATGAGCTGATAAGATCCCTTCTCATGCTTTGCAACAGTGAAGGCAGTCTATGGCGTGCGCTTCAAGGGCGTGAGGGAGTTCAGCTGTTAATTTCTCTTCTTGGACTGTCATCAGAGCAACAGCAGGAATGTGCAGTTGCACTGCTTTGCCTTTTATCTAGTGAAAATGATGAGAGTAAATGGGCTATCACTGCTGCTGGAGGCATACCCCCACTTGTTCAAATTCTGGAGACTGGGTCTGCAAAAGCCAAGGAAGATTCTGCAACAATCCTTGGAAACCTCTGTAACCACAGTGAAGATATAAGAGCATGTGTTGAAAGTGCTGATGCTGTTCCTGCTCTGTTATGGCTATTGAAGAATGGAAGTCAGAATGGGAAAGAGATTGCAGCAAAGACATTGAACCACCTTATCCATAAATCGGATACAGGGACAATCAGCCAACTCACTGCCTTATTAACAAGTGATCTACCTGAATCTAAAGTTTATATTTTGGATGCACTGAAAAGTTTGCTTTCCGTGGCACCTCTAAAGGATATATTGCATGAAGGGAGTGCTGCAAATGATGCGATTGAGACGATGATTAGAATTTTGAGTTCCACACAAGAAGAGACTCAAGCTAAGTCTGCGTCAGTTTTAGCCGGACTCTTTGATCTCCGGAGGGACTTGCGTGAAAGTAGCATTGCTGTTAAGACTCTTTGGTCAGCTATGAAGCTCCTAAATGTGGAGTCCGAAAAGATCTTAGTAGAGTCTTCTTGCTGCCTTGCTGCTGTTTTCCTTTCAATTAAACAAAACCGGGATGTGGCTGCAGTTGCTAGAGAGGCATTGGCTCCGTTAGTTGTGCTTGCTAACTCTTCAGTTCTGGAAGTTGCAGAACAGGCAACGCGGGCTTTGGCTAATCTTCTTTTGGATAATGAAGTCTCAGAGGAAGCATTTCCTGAAGAAATTATTTTGCCCATTACGAGAGTGTTGCATGAAGGCACGGTCGACGGAAGAACCCATGCTGCAGCAGCAATTGCTCGCCTTCTCCAATGTCGCACAATTGATTTTGCACTGGCTGATTGTGTGAATCGTGCTGGAACAGTTCTTGCATTAGTTTCTCTTCTGGAATCAGTTAGTGTTGAATCTGCTGCCGCATCAGAAGCCCTTGATGCACTTGCTTTGCTATCAAGGTCAAAAGGAACTAGTGGGCATATCAAGCCTGCATGGGAAGTCCTAGCTGAATTTCCCCAGACTATAGCCCCAATAGTTTCATGTATAGCTGATGCGACACCCTTGTTGCAGGACAAAGCTATAGAAATTTTGTCAAGGCTCTGCCGAGATCAGCCTGTTGTCCTGGGAAATACAATTGCTAGTAGCATTGGGTGTATTTCTTCAATTGCAAGAAGGGTGATTAGTTCCAAAAACACAAAGGTCAAAGTTGGAGGAACTGCACTTCTGATTTGTGCTGCAAAAGTTCATCACCAGAGAGTGGTAGAAGCTCTGAATGAGTCAAACTCATGTTCCTATCTTATTAAATCTCTTGTTGAAATGCTGAGTTCGGCACAGTCATCTCCATCAATAGACAAGGGGGACAATGAAAGCAAGGACATAAGCCTTTACAGGCCTACTAAAGGACAAACTAGAAATGGAGAAACTGAAAATTGCACGGAAGTTATTTCTGGTGACAACATAGCGATATGGCTTCTTTCTGTTCTTGCATGTCACGATGACAGAAGTAAAGTTGCCATTATGGAGGCTGGAGCAGTTGAAGTTCTCACTGACAAGATCTCACATTGTTTGTTACAAGCTGCTCAGATTGATTCTATAGAAGATAGCACTACATGGGTTTGTGCTTTACTGCTCGCTATTTTGTTTCAAGATAGAGATATCATACGAGCACCTGCAACGATGCGGTCTGTTCCTGTGCTTGCAAATTTGTTGAAGTCAGAGGAGTCAGCAAACAGATATTTTGCAGCACAAGCAGTGGCCAGTCTAGTCTGTAATGGTAGCAGAGGGACTCTTCTGGCTGTCGCAAATTCAGGAGCTGCTGGTGGGCTTATTTCCTTACTTGGTTGTGCTGATGTTGATATATGTGATCTCTTAGAACTGTCAGAGGAGTTTGCTTTGGTGTGCAATCCAGAGCAAGTTGCTCTGGAGAGATTGTTTAGAGTTGATGACATTAGAGTTGGTGCTACTTCTCGGAAGGCAATACCTTTACTTGTTGATCTACTCAAACCAATTCCAGATCGACCTGGGGCACCTTTTCTAGCACTAGGGCTCCTGACTCAGCTTACGAGAGACAGTCCCTCAAACAAGACTGTAATGGTAGAATCAGGGGCTTTAGAGGCACTGACTAAATATCTTTCACTTGGTCCCCAAGATGCAACAGAGGAAGCAGCCACGGATTTGTTGGGGATCCTGTTTGGCAGTGCTGAAATACGGAGACATGAGTCTGCATTTGGTGCTGTCAATCAACTTGTAGCAGTCCTACGTCTAGGGGGAAGAGGTGCTCGTTACAGTGCTGCTAAAGCATTGGAGAGCCTATTTTCCTCAGATCATATCAGGAATACGGAAACTGCTCGACAATCTGTTCAACCCCTAGTGGAGATTCTCAACAATGGCCTGGAGAGGGAGCAACATGCTGCTATCGCTGCATTGGTTAGATTATTGTGTGAAAGTCCATCAAGAGCCCTTGCTGTTGCAGATGTTGAAATGAATGCAGTGGATGTTCTTTGCAGGATCCTTTCTTCAAATTGTTCCATGGAGCTGAAGGGAGATGCTGCAGAGTTGTGTTGTGTTCTTTTTGGAAATACAAGAATTAGGTCTACAATGGCTGCCGCTCGCTGTGTTGAGCCTCTGGTATCTCTCCTTGTAACTGAATTCAGTCCTGCTCAGCATTCAGTAGTCCGTGCGCTGGATAAACTATTGGATGATGAGCAACTGGCCGAACTGGTTGCTGCACATGGTGCCGTTATTCCTCTTGTTGGCCTTCTGTTTGGTAGGAATTACACACTTCATGAGGCTATTTCAAGAGCTCTTGTGAAGTTAGGGAAAGACAGGCCTGCTTGTAAGATGGAAATGGTAAAAGCTGGAGTCATTGAGAGCATATTGGATATCCTCCATGAAGCACCTGATTTTCTCTGTGCCGTATTTGTGGAATTGCTTCGGATATTGACTAACAATACTAGCATTGCAAAGGGTCCATCTGCAGCCAAAGTGGTTGAACCCCTTTTTCTGTTGCTAACAAGACCAGAGTTTGGTCCTGATGGACAGCATAGTGCTTTACAGGTTCTTGTTAATATTTTGGAGCATCCTCAGTGTCGTGCTGACTATAGCCTGACCCCTCATCAAGCTATTGAACCACTCATTCCTTTACTTGATTCTCCAACTCCAGTAGTACAACAGTTGGCAGCCGAACTTCTCTCACATCTTCTCTTGGAAGAACATCTTCAGAAGGACTCAGTAACACCGCAAGCAATTAGCCCCCTAATACGAGTTCTAGGGTCTGGTATACAGATTTTGCAACAGAGAGCTATAAAAGCTCTTGTTTGTATTGCATATACTTGGCCAAATGAAATTGCAAAAGAGGGTGGAGTTAATGAGCTGTCCAAAGTTATTTTGCAAGCTGATCCTCCATTGCCTCATGCCTTGTGGGAATCTGCTGCTTCTGTTTTAGCTAGTATTTTGCAGTATAGTTCTGAATATTATTTGGAGGTACCTGTTGCAGTGTTGGTAAGGTTGCTGCGTTCTGGCACAGAAAGCACAGTGATTGGTGCATTAAATGCTTTGCTTGTGTTGGAAAGTGACGATGCAACCAGTGCTGAGGCAATGGCTGAAAGTGGTGCCGTAGAGGCACTTTTGGAACTTCTCAGGTGTCATCAGTGCGAGGAAACTGCATCAAGACTGCTGGAAGTGTTGCTAAACAATGTGAAGATCAGAGAAACAAAAGCTGCTAAGTCTGCAATTTCACCATTATCCCAGTACCTTTTGGATCCGCAAACCCAAACCCAGCAGGCAAGGTTGCTCGCAACTCTAGCTCTTGGTGATCTATTCCAGAATGAGGGCCTTGCTCGAACTACAGATGCTGTTTCAGCTTGTCGAGCTCTAGTAAATGTGCTTGAAGACCAGCCTACAGAAGAAATGAAAGTGGTAGCTATATGTGCCTTGCAGAACCTCGTAATGTACAGCAGATCGAATAAAAGAGCAGTTGCAGAAGCTGGTGGTGTTCAGGTTGTACTGGACCTCATCGGTTCAAGTGATCCAGATACATCAGTTCAGGCAGCAATGTTTGTTAAACTTCTCTTCTCTAACCATACTATTCAAGAGTATGCTTCTAGCGAAACAGTGAGAGCTATAACTGCTGCTATTGAAAAGGACTTGTGGGCCAGTGGAAGCGTGAATGAGGAGTATCTGAAAGCTCTAAATGCACTCTTTAGTAACTTCCCGCGTTTGAGAGCCACGGAGCCTGCGACATTGAGTATTCCCCATCTGGTCACATCGCTTAAGACTGGCTCTGAGGCAACTCAAGAAGCTGCCTTGGACTCACTTTTTCTTCTTCGGCAAGCTTGGTCGGCATGCCCAGCAGAAGTCTCTAAAGCTCAGTCAGTTGCTGCTGCAGAGGCAATTCCTTTGCTGCAATATTTGATCCAATCTGGCCCACCTCGCTTTCAGGAAAAGGCAGAACTTCTTTTGCAGTCTTTGCCTGGGACTTTAATGGTAATTATCAAGCGTGGCAACAATTTGAAGCAATCAGTTGGAAACCCTAGTGTCTACTGCAAGGTCACACTTGGAAATACTCCACCTAGGCAGACCAAGATTGTGTCGACTGGTCCTACTCCTGAGTGGGATGAGAGTTTTGCATGGGCTTTTGATAGCCCGCCAAAAGGACAGAAGCTTCACATCTCTTGTAAGAATAAGAGCAAAATCGGGAAGAGCTCATTTGGAAAAGTAACGATCCAGATCGATCGGGTCGTAATGCTTGGTGCTGTTGCCGGGGAGTACACTCTGTTGCCCGTAAGCAAAAGCGGACCCCCTCGAAATCTGGAAATTGAATTCCAGTGGTCCAACAAATGA 6333 0.4503 MKMALRDRGSMEDPDGTLASVAQCIEQLRRNSSTVQEKESSLKQLLDLIDTRDNAFSAVGSHSQAVPILVSLLRSGSLGVKMHAATVLGSLCKEDELRVKVLLGGCIPPLLGLLRSSSTEGQIAAAKAIYAVSQGGARDHVGSKIFSTEGVVPVLWEQLENGLKAGNLVDNLLTGALRNLSSSTEGFWFATIEAGGVDILVKLLTTGNSSTQANVCFLLACMMMEDASVCSRVLAAEATKQLLKLLGSGNEAPVRAEAAGALKSLSAQCKEARREIASSNGIPALINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGESLDSCTSPAQIADTLGALASALMIYESKAESIRASDPLIVEQILVKQFKPRLPFLVQERTIEALASLYGNAILSRKLTNSDAKRLLVGLVTMATNEVQDELIRSLLMLCNSEGSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSSENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILGNLCNHSEDIRACVESADAVPALLWLLKNGSQNGKEIAAKTLNHLIHKSDTGTISQLTALLTSDLPESKVYILDALKSLLSVAPLKDILHEGSAANDAIETMIRILSSTQEETQAKSASVLAGLFDLRRDLRESSIAVKTLWSAMKLLNVESEKILVESSCCLAAVFLSIKQNRDVAAVAREALAPLVVLANSSVLEVAEQATRALANLLLDNEVSEEAFPEEIILPITRVLHEGTVDGRTHAAAAIARLLQCRTIDFALADCVNRAGTVLALVSLLESVSVESAAASEALDALALLSRSKGTSGHIKPAWEVLAEFPQTIAPIVSCIADATPLLQDKAIEILSRLCRDQPVVLGNTIASSIGCISSIARRVISSKNTKVKVGGTALLICAAKVHHQRVVEALNESNSCSYLIKSLVEMLSSAQSSPSIDKGDNESKDISLYRPTKGQTRNGETENCTEVISGDNIAIWLLSVLACHDDRSKVAIMEAGAVEVLTDKISHCLLQAAQIDSIEDSTTWVCALLLAILFQDRDIIRAPATMRSVPVLANLLKSEESANRYFAAQAVASLVCNGSRGTLLAVANSGAAGGLISLLGCADVDICDLLELSEEFALVCNPEQVALERLFRVDDIRVGATSRKAIPLLVDLLKPIPDRPGAPFLALGLLTQLTRDSPSNKTVMVESGALEALTKYLSLGPQDATEEAATDLLGILFGSAEIRRHESAFGAVNQLVAVLRLGGRGARYSAAKALESLFSSDHIRNTETARQSVQPLVEILNNGLEREQHAAIAALVRLLCESPSRALAVADVEMNAVDVLCRILSSNCSMELKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVTEFSPAQHSVVRALDKLLDDEQLAELVAAHGAVIPLVGLLFGRNYTLHEAISRALVKLGKDRPACKMEMVKAGVIESILDILHEAPDFLCAVFVELLRILTNNTSIAKGPSAAKVVEPLFLLLTRPEFGPDGQHSALQVLVNILEHPQCRADYSLTPHQAIEPLIPLLDSPTPVVQQLAAELLSHLLLEEHLQKDSVTPQAISPLIRVLGSGIQILQQRAIKALVCIAYTWPNEIAKEGGVNELSKVILQADPPLPHALWESAASVLASILQYSSEYYLEVPVAVLVRLLRSGTESTVIGALNALLVLESDDATSAEAMAESGAVEALLELLRCHQCEETASRLLEVLLNNVKIRETKAAKSAISPLSQYLLDPQTQTQQARLLATLALGDLFQNEGLARTTDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPDTSVQAAMFVKLLFSNHTIQEYASSETVRAITAAIEKDLWASGSVNEEYLKALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDSLFLLRQAWSACPAEVSKAQSVAAAEAIPLLQYLIQSGPPRFQEKAELLLQSLPGTLMVIIKRGNNLKQSVGNPSVYCKVTLGNTPPRQTKIVSTGPTPEWDESFAWAFDSPPKGQKLHISCKNKSKIGKSSFGKVTIQIDRVVMLGAVAGEYTLLPVSKSGPPRNLEIEFQWSNK* 2111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01654 2110 Gene3D - 568 777 IPR011989 -
Eupl13g01654 2110 Gene3D - 778 1135 IPR011989 -
Eupl13g01654 2110 Coils Coil 255 275 - -
Eupl13g01654 2110 SMART arm_5 1357 1397 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1440 1480 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 691 729 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 439 481 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 226 267 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 775 817 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1527 1566 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 269 318 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 483 523 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1188 1229 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 94 134 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 525 565 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1143 1186 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1690 1728 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 51 93 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1398 1438 IPR000225 GO:0005515
Eupl13g01654 2110 SMART arm_5 1816 1856 IPR000225 GO:0005515
Eupl13g01654 2110 Gene3D - 6 379 IPR011989 -
Eupl13g01654 2110 Gene3D - 403 564 IPR011989 -
Eupl13g01654 2110 SUPERFAMILY ARM repeat 497 1087 IPR016024 -
Eupl13g01654 2110 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1155 1199 IPR000225 GO:0005515
Eupl13g01654 2110 Gene3D C2 domain 1989 2110 IPR035892 -
Eupl13g01654 2110 CDD C2 1991 2081 - -
Eupl13g01654 2110 MobiDBLite consensus disorder prediction 943 971 - -
Eupl13g01654 2110 SUPERFAMILY ARM repeat 1573 1986 IPR016024 -
Eupl13g01654 2110 Pfam C2 domain 1989 2080 IPR000008 -
Eupl13g01654 2110 Gene3D - 1136 1279 IPR011989 -
Eupl13g01654 2110 Coils Coil 717 737 - -
Eupl13g01654 2110 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 3 2110 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Eupl13g01654 2110 Pfam Armadillo/beta-catenin-like repeat 483 522 IPR000225 GO:0005515
Eupl13g01654 2110 Pfam Armadillo/beta-catenin-like repeat 62 92 IPR000225 GO:0005515
Eupl13g01654 2110 SUPERFAMILY ARM repeat 1145 1527 IPR016024 -
Eupl13g01654 2110 SMART C2_3c 1990 2086 IPR000008 -
Eupl13g01654 2110 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1339 1573 - -
Eupl13g01654 2110 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 494 536 IPR000225 GO:0005515
Eupl13g01654 2110 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1989 2092 IPR035892 -
Eupl13g01654 2110 ProSiteProfiles C2 domain profile. 1970 2087 IPR000008 -
Eupl13g01654 2110 SUPERFAMILY ARM repeat 17 645 IPR016024 -
Eupl13g01654 2110 Gene3D - 1572 1988 IPR011989 -
Eupl13g01654 2110 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1989 2110 - -
Eupl13g01654 2110 Gene3D - 1280 1571 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01654 Eupl-Chr13 34850465 34872341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01654 446 578 U-box Gene Family AT2G23140 39.259 1.40e-10 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01654 - - nnu:104600075 3592.36