Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01650 ATGGTGGCTGTGAAGAAGACGAAGAAGACTCATGAGAGCATCAACAGCAGACTCGCTCTCGTGATGAAGAGCGGGAAGTACACTCTCGGATACAAAACCGTACTTGATTCTCTCAGAAGCTCCAAAGGAAAACTGATAATTATTTCAAACAATTGCCCACCTTTGAGGAAGTCTGAGATCGAGTACTATGCGATGCTTGCAAAGGTTGGGGTCCACCATTTCAATGGAAGTAAGTTATTTGATCTCACCGATGTAATCTCTACCCCTTTGCTCTTATTGTATTGTTATTTGTTTTGTAACCATTTGTTCTTGTTTGAGGTCTTCATTAACATCCTTTTGATGCTATATAATGCTTCCAATCTCATGGAATATCCATCTAGATTTTATGCTTGA 393 0.3969 MVAVKKTKKTHESINSRLALVMKSGKYTLGYKTVLDSLRSSKGKLIIISNNCPPLRKSEIEYYAMLAKVGVHHFNGSKLFDLTDVISTPLLLLYCYLFCNHLFLFEVFINILLMLYNASNLMEYPSRFYA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01650 130 PANTHER RIBOSOMAL PROTEIN L30 1 79 IPR039109 GO:0003723
Eupl13g01650 130 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 78 IPR004038 -
Eupl13g01650 130 Gene3D - 1 87 IPR029064 -
Eupl13g01650 130 SUPERFAMILY L30e-like 13 78 IPR029064 -
Eupl13g01650 130 FunFam 60S ribosomal protein L30 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01650 Eupl-Chr13 34808118 34811923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01650 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 88.000 4.98e-44 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01650 K02908 - fve:101315436 149.443