Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01640 ATGGGGTTCATGTCTCGAAACAGAGATCTAGCGTTTCATTTCTCGAGGCAAGGCACTCTGTACAATCTCACCCTCGATGAAGTCCAAAACCAGCTTGCTAGTTCAGGAACGCCCTTGAACAGCATGAACCTGGATGAGTTCTTGAAGACCGTCGTCGCCACAGATAAAAATCCCCATCAGATCGGCAGCATTAACAATGCCTCTTCATCTTCTTCTTCTTCTTCATCATCCGCTGCTTCCTTCTTTCCCGGCAATCTCAATTTGACTCGGACGCTGAATAGAAAATTTGAGGACGATATGCGGACTGAAATAGTTCAGCAAGATCAGGGCAATGTAGGGGGTGCCTGGGGTGGAGATGGGTCAATGCAGAGGCAGCCTGAACTCGAAATCACCCTTGAGGATTTCCTGGTCCATGCTGGTGTCATTAATAAAGGGAATGGGGATGCTGTTGTTAATCCTCAGCCATTGGTGGAAATTGACCCAATGGTTGTGGCATTGCAACAGGCAGATTGGTTGCAGTATCAGGTTCAGCAGCAGCAGCAGCAGATGACGGGTGTGTTGGGCTCGTGTTTGCCTGGTGCGGCGTCATTGTTTGGAAACCCTGTAGTGGATGTTGGATATTCAGACAACCATATGGCGCTGTCAGTGCCAATGTCGATGATTGGGGCCACTTCATCAGACTTACATGCACCAGCTGAGAGGAAACATCGGTTTTCCGATGATTTGAAAGATGAAACAATTGAGAGGAGGCAGAGAAGGATGATCAAGAACCGAGTGTCAGCGGCTAGGTCAAGGGCGAGGAAGCAGGCCTATACCAGTAAGTTGGAGCATGAACTGTTACAATTGAGGGAAAGTAATGAGAGACTCGAGAAGCTGAAGGAGATGGATAGGCTTTTACCTTTGGATCCAACTCCGCAGGCCAAATACCAACTCAGGCGTACCAGCTCGGCACCATTCTGA 960 0.4875 MGFMSRNRDLAFHFSRQGTLYNLTLDEVQNQLASSGTPLNSMNLDEFLKTVVATDKNPHQIGSINNASSSSSSSSSSAASFFPGNLNLTRTLNRKFEDDMRTEIVQQDQGNVGGAWGGDGSMQRQPELEITLEDFLVHAGVINKGNGDAVVNPQPLVEIDPMVVALQQADWLQYQVQQQQQQMTGVLGSCLPGAASLFGNPVVDVGYSDNHMALSVPMSMIGATSSDLHAPAERKHRFSDDLKDETIERRQRRMIKNRVSAARSRARKQAYTSKLEHELLQLRESNERLEKLKEMDRLLPLDPTPQAKYQLRRTSSAPF* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01640 319 MobiDBLite consensus disorder prediction 295 319 - -
Eupl13g01640 319 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 318 IPR043452 GO:0003700|GO:0045893
Eupl13g01640 319 Pfam bZIP transcription factor 249 295 IPR004827 GO:0003700|GO:0006355
Eupl13g01640 319 SUPERFAMILY Leucine zipper domain 249 291 IPR046347 GO:0003700|GO:0006355
Eupl13g01640 319 Coils Coil 272 295 - -
Eupl13g01640 319 SMART brlzneu 245 313 IPR004827 GO:0003700|GO:0006355
Eupl13g01640 319 Gene3D - 247 299 - -
Eupl13g01640 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 291 IPR004827 GO:0003700|GO:0006355
Eupl13g01640 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Eupl13g01640 319 CDD bZIP_plant_BZIP46 249 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01640 Eupl-Chr13 34683442 34697871 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01640 14 319 bZIP Transcription Factor Family AT3G56850 39.103 5.49e-52 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g01640 bZIP_1 4e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01640 K14432 - nnu:104605887 315.849