Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01634 ATGAGCTCTCCATCAACTCAGTTTACCACCTCAAGAAGGATGGGTATATATGAACCACCCCACCAAGTTAGCATGTGGGCAGATTCCTTCAAAGCTGATAACAGTCCAAATACAGGGGCATCCATGATCTTAGAGGTGGACACAAAGCTTGACAACAAGTCCGAAGACACTTCTCATGGAACACTAGGACCTTCAAAAAAGTACGATCAGGAAGCAACCAAACCTGCTGAAAAGGTATTAAGACGTCTTGCACAAAATCGCGAGGCTGCCCGTAAAAGTCGTGTGCGTAAGAAGGCCTATGTCCAACAATTGGAGACCAGTCGTTTGAAGCTGACACAATTAGAGCAGGAGCTTGAGCGAGCTAAACAGCAGGGTGTATACATAGGTGGTGCCTTAGATACTAGTCATCTAGGGTTGTCTGGAACTGTTAACTCAGGGGTTGCTGCATTTGAGATGGAGTATGGACACTGGATTGAAGAACAAAATAGACAGATTTGTGAACTAAGAACTGCTTTGCAATCTCATGTAACTGATATAGAGCTTCGCATACTTGTTGATAGTGGCATGAGACACTATTGCGATCTTTTCCGTATGAAAGCAGCTGCTGCAAAGGCTGATGTCTTCTATTTGATGTCTGGCATGTGGAAAACCTCCGCCGAACGTTTTTTTATGTGGATGGGAGGAGTTCGACCGTCAGAGCTTCTAAAGGTTCTCATGCCTCAACTTGATCCGTTGACAGAGCAACAACTTTTGGAGGTCTGTAACCTGCAACAATCATCTCAGCAAGCCGAAGATGCTCTTTCTCAAGGGATGGATAAGCTTCAGCAAACTCTTGCTGAGACTCTAGCGGTTGATCCATTGGGTACTGGAAATTATATGGCACAGATGGCTACAGCGATGGGGAAGTTGGAAGCTCTTGTGACCTTTGTGAACCAGGCAGACCACCTTCGCCAGCAGGCCCTGCAGCAGATGTTTCGCATCCTAACAACTCGCCAGGCAGCCCGAGGCCTGCTCGCCTTAGGAGATTACTTCCAAAGGCTTCGGGCCCTGAGTTCCCTTTGGGCTGCTCGCCCTCGTGAACCAGCATGA 1089 0.4747 MSSPSTQFTTSRRMGIYEPPHQVSMWADSFKADNSPNTGASMILEVDTKLDNKSEDTSHGTLGPSKKYDQEATKPAEKVLRRLAQNREAARKSRVRKKAYVQQLETSRLKLTQLEQELERAKQQGVYIGGALDTSHLGLSGTVNSGVAAFEMEYGHWIEEQNRQICELRTALQSHVTDIELRILVDSGMRHYCDLFRMKAAAAKADVFYLMSGMWKTSAERFFMWMGGVRPSELLKVLMPQLDPLTEQQLLEVCNLQQSSQQAEDALSQGMDKLQQTLAETLAVDPLGTGNYMAQMATAMGKLEALVTFVNQADHLRQQALQQMFRILTTRQAARGLLALGDYFQRLRALSSLWAARPREPA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01634 362 SUPERFAMILY Leucine zipper domain 78 119 IPR046347 GO:0003700|GO:0006355
Eupl13g01634 362 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Eupl13g01634 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 120 IPR004827 GO:0003700|GO:0006355
Eupl13g01634 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Eupl13g01634 362 Gene3D - 76 125 - -
Eupl13g01634 362 CDD bZIP_HBP1b-like 78 130 - -
Eupl13g01634 362 SMART brlzneu 74 137 IPR004827 GO:0003700|GO:0006355
Eupl13g01634 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 360 - -
Eupl13g01634 362 FunFam BZIP family transcription factor 77 126 - -
Eupl13g01634 362 Pfam bZIP transcription factor 77 118 IPR004827 GO:0003700|GO:0006355
Eupl13g01634 362 MobiDBLite consensus disorder prediction 48 74 - -
Eupl13g01634 362 Pfam Seed dormancy control 164 239 IPR025422 GO:0006351|GO:0043565
Eupl13g01634 362 Coils Coil 97 124 - -
Eupl13g01634 362 MobiDBLite consensus disorder prediction 48 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01634 Eupl-Chr13 34598134 34624180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01634 1 361 Calmodulin-binding Proteins AT5G65210 67.847 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g01634 DOG1 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01634 K14431 - ming:122083871 597.43