Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01631 ATGGCGGCGAACCTCTCCCGCTGCAATCTCAGAAGAAAACCCTCAGATATCTACTCAATTCGAAATTTCTTAACACAGATTTCTCTGAAACATGCTTCAATCTCGCGACCCATCGATTTCTTCCAAAATCCCCAAAATCCATGGATTCAATCACCCGAAACAACCCAAATTCCAAACCCTAGGGTTCCAATTCGTTTCATGTCGACGCAATCCAGCAAATTTCCGGAATATGAGATGCCGTCGGTTACTTGGGGCGTCGTTCAAGGCCGAAAGGAGAAGCTCGTCTCTCGCGTCATAATCTGTGATTACTTGAAGAGTTTGGGAATAATTCCAGATGAATTGGAACACTTGGAAGTACCGTCGACAATCGAAGTGATGAAAGAAAGAGTCGAATTCCTTCAGAAAATAGGGTTAACGATTGATGACATTAACGAGTACCCTTTAATCTTAGGATGTAGCGTTCGGAAGAATATAATCCCTGTTTTGGGTTATTTGGAGAAGATTGGGATTCCAAGATCGAAACTTGGAGAATTTGTGAAGAATTATCCACAAGTTCTCCATGCAAGTGTGGTTGTCGAGCTTGTTCCTGTGGTGAAGTCTCTTCGGGGTCTTGATGTCGAGAAGCCGGATATTGGTTATGTGTTGCAGAAGTACCCAGAGCTTTTAGGGTTTAAGCTTGAAGGGACGATGAGCACTTCGGTCGCTTATCTTGTCAGCATTGGAGTCTGCCCAAGAGATATCGGGCCGATGGTCACACAGTACCCTTACTTTCTTGGAATGAGAGTGGGGACTACAATTAAGCCCATTGTTGATTACTTGGTTTCTCTAGGGCTACCAAAGAAGGTTTTGGCTCGGATGTTTGAGAAACGGGCTTATATCCTTGGGTACGATCTGGAAGAGACCATTAAACCGAATGTTGACTGTTTGATTAGTTTTGGAATCCGGAGAGAAACAGTAGCTTCAGTTATCGCCCAGTACCCACAAATCCTTGGGCTCCCTTTGAAGGCTAAGTTGTCCTCACAGCAGTACTTCTTTAACTTGAAGCTCAAGATTGAGCCTGAAGGGTTTGCTCGGGTCATAGAGAAGATGCCCCAGATAGTTAGTCTTAACCAAAGTGTGATTCTGAAACCCATTGAATTCCTTCGAGGGAGGGGTATACTGGCCGACGATGTGGCTAAAATGGTGGTGAAGTGTCCCCAGTTGGTTGCAGTTCGAGTTGAGTTCATGAAGAACAGTTTTTACTTCTTTAAGAGTGAGATGAAGAGGTCGTTGGAAGAGCTCCTAGAGTTCCCAGAGTACTTCACCTACAGCTTGGAGTCGAGGATCAAACCCAGGTACCAGAGGTTATCAAACAAGGGGGTTAAATGTAGTTTGGCTTGGTTTCTTAACTGTAGTGACCAGAGGTTTGAAGAGAGGTTACAGGCTGATTATTTTGAGACAGAGAGTGTTGGACCATCGTTCTGTGTGGGAGGGAAGCTAGAACTTCCAGGGAGTGAGATTGTGTCGTCAGAGGAGGAAGATGAGAGTGACGATGAGGTACTCTATAGACGCACTGTTTCTCTGTAG 1566 0.4489 MAANLSRCNLRRKPSDIYSIRNFLTQISLKHASISRPIDFFQNPQNPWIQSPETTQIPNPRVPIRFMSTQSSKFPEYEMPSVTWGVVQGRKEKLVSRVIICDYLKSLGIIPDELEHLEVPSTIEVMKERVEFLQKIGLTIDDINEYPLILGCSVRKNIIPVLGYLEKIGIPRSKLGEFVKNYPQVLHASVVVELVPVVKSLRGLDVEKPDIGYVLQKYPELLGFKLEGTMSTSVAYLVSIGVCPRDIGPMVTQYPYFLGMRVGTTIKPIVDYLVSLGLPKKVLARMFEKRAYILGYDLEETIKPNVDCLISFGIRRETVASVIAQYPQILGLPLKAKLSSQQYFFNLKLKIEPEGFARVIEKMPQIVSLNQSVILKPIEFLRGRGILADDVAKMVVKCPQLVAVRVEFMKNSFYFFKSEMKRSLEELLEFPEYFTYSLESRIKPRYQRLSNKGVKCSLAWFLNCSDQRFEERLQADYFETESVGPSFCVGGKLELPGSEIVSSEEEDESDDEVLYRRTVSL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01631 521 FunFam Transcription termination factor MTERF4, chloroplastic 265 478 - -
Eupl13g01631 521 Pfam mTERF 162 470 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 Gene3D Transcription termination factor 3, mitochondrial 126 262 IPR038538 -
Eupl13g01631 521 Gene3D Transcription termination factor 3, mitochondrial 263 480 IPR038538 -
Eupl13g01631 521 FunFam Transcription termination factor mterf4, chloroplastic 126 264 - -
Eupl13g01631 521 PANTHER CGI-12 PROTEIN-RELATED 161 293 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 284 315 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 248 279 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 176 207 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 357 387 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 392 423 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 212 243 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 320 352 IPR003690 GO:0003690|GO:0006355
Eupl13g01631 521 SMART mt_12 424 455 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01631 Eupl-Chr13 34540437 34542418 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Eupl13g01631 mTERF 5.1e-108 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01631 K15031 - nnu:104589308 863.988