Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01629 ATGGCCGCATTGCAACAACCGCCGGTGGCATTTCAAGCTAAAACTTCACCGTCAACTCGAATCACCGGCAAAACCCTAACGACAAAACCCATCCGATTGTCCTCCGGCAGGTTACCATGCCTCAAACTCCCAAAACTTGCCGTAAAACTCGCCAGAAAAACCAGAAGGCACGGCGGCTGCGCCGCCAGCTCAATGATGATGGATACGGCCGCTGGAAGGTACGCTTCCGCCCTCGCAGAAGTCGCAAAATCAAGCGGAACCCTAAAGTCAACCAGCGCAGATATGGAGAAACTCGAGAAAATCTTCTTACACCCTCAGATCTACGACTTCTTCGTGAATCCGACCATCGACATCGAGAAAAAACGCATAGTGATCTCCGAGATCGCGACCTATTCAAGCCTCCAAGCTTACACGACGAATTTCCTCAACATATTGATCGACGTGAATCGGATCGAGCTGATCAAAGAAATCGTTAAGGAATATGAGGTGTTCTCCAACAAATTGACGAATACGGAGTTGGCAATCGTGACTTCGGTGGTAAAGTTGGAGCCTCAGCAGTTAACGCAGATCGCAAAGGGAGTGCAGAGGTTGACGGGAGCGAAGAACGTGAGGATCAAGACCGTGATAGATCCATCGCTGGTTGCAGGGTTTACGATCAGGTACGGGAGCTCGGAATCAAAGATGATCGACATGAGCGTGAAAAAACAGCTCGAAGAAATCGCGAGTCAGCTCGATTTCAGTGATATTTCTCTCGCTGTCTGA 762 0.4961 MAALQQPPVAFQAKTSPSTRITGKTLTTKPIRLSSGRLPCLKLPKLAVKLARKTRRHGGCAASSMMMDTAAGRYASALAEVAKSSGTLKSTSADMEKLEKIFLHPQIYDFFVNPTIDIEKKRIVISEIATYSSLQAYTTNFLNILIDVNRIELIKEIVKEYEVFSNKLTNTELAIVTSVVKLEPQQLTQIAKGVQRLTGAKNVRIKTVIDPSLVAGFTIRYGSSESKMIDMSVKKQLEEIASQLDFSDISLAV* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01629 253 NCBIfam ATP synthase F1 subunit delta 71 244 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 Gene3D - 70 163 IPR026015 -
Eupl13g01629 253 PRINTS ATP synthase delta subunit signature 139 150 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 PRINTS ATP synthase delta subunit signature 219 237 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 PRINTS ATP synthase delta subunit signature 150 164 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 PRINTS ATP synthase delta subunit signature 201 216 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 PRINTS ATP synthase delta subunit signature 70 89 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 PANTHER ATP SYNTHASE DELTA CHAIN 61 245 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 203 222 IPR020781 GO:0015986|GO:0016020|GO:0046933
Eupl13g01629 253 Hamap ATP synthase subunit delta [atpD]. 66 246 IPR000711 GO:0015986|GO:0046933
Eupl13g01629 253 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 65 170 IPR026015 -
Eupl13g01629 253 Pfam ATP synthase delta (OSCP) subunit 71 244 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01629 Eupl-Chr13 34509823 34510899 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01629 1 252 Primary Pumps ATPases AT4G09650 54.902 3.46e-88 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01629 K02113 - nnu:104601478 330.872