Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01626 ATGTATCTCCATCCCAATCTCCGTTTCTTTCTCTACTCTTCGTTTTTCGTCTACGGGATTGTTCTGGGTTCCTCCGAAGACGAAGTTCGATCTCTTCTCGAATTCAAGAAAGGGATCCGAGATGATCCCCTCGACCGCGTTCTGAATTCATGGAACCGGTCTTTGATGGTATCGAATGATTGCCCTCGGAGCTGGCACGGAATCGAGTGCGACGATGCTGGTAATGTGATTGCTATCGTTCTCGAAGGATTGAGTTTGACTGGAGATTTGAAGTTCTCCACCTTGAATGGACTGAAAATGCTGAGGAATCTGAGTCTTTCAGGGAATTTCTTCACTGGCCGGCTTGTCCCGACGATGGGAACGTTGAGTTCGTTGCAGCATTTGGATCTGTCGAGGAATCAATTCTATGGGCCGATCCCTGCTAGGATTAATGATTTACGGGGTCTGAATTATCTGAATCTCTCGTCGAATAATTTCACTGGTGGACTCCCGGGTGGAATCAACAATCTACAGCAGTTGAAAGTACTGGATTTGCATTCTAATTTCCTTCGGGGGAATATTGGGGATTTGTTATCTGAGCTGCGGAATGTGGAACACATCGATTTGAGCTGTAATGTGTTCTATGGGGGGCTTTCGTTGGATTCGGAGAACATCTCGAGCTTGGCTAATACTGTTCGTCATGTGAATTTGAGTCACAATAAACTGAATGGAGAGTTCTTTTCGGAGGATTTGATTAAGTTGTTTAGGAACTTGGAAGTCTTAGACTTGGGTGACAATCAGCTTACTGGAGAGCTCCCTTCGATTGGCTCATTGCCCTACCTTCGAGTTTTCCGGGTTGGAACCAATCAGTTAAATGGATCTATACCAGAAGAGCTGTTTGAGAGTTCGATTCCATTGGAAGAACTGGATCTCAGCGGCAATGGCTTTTCAGGTTCAATTCACAGTATTAACTCCACGAATTTGAAGGTTTTGAATCTTTCGTCAAATGTGCTATCAGGCTCCTTGCCTTCTACTTTGGGAAGTTGTGTGATGGTGGATTTGAGCAAAAATAATATTTCTGGAGACATATCTGCTATGGAGAATTGGGGGACCAATTTGAAGGTTATTGATTTGAGTGCAAATGAATTGTCAGGAAGCTTTCCAAATTTGACATCCCAATTTGAGATGTTGATTTCTATTAACATTAGGAGTAATGCTTTAGTAGGTCGCCTGCCTCTTGCATTAGGGACCTCTCCAAGACTGTCTTCAGTTGACCTTAGCTTAAATGAACTTACAGGATCTATTCCAAGTAGCTTCTTCACTTCATTGACCTTGATAAATCTCAATCTTTCAGGAAATAATTTTACAGGACCAATCCCTCTTCAAGGTTCACACACAGCTGAATTATTAGTTCTACCTTCTTATTTGCCGATGGAATCTCTTGATCTCTCTAATAACTCTTTAACAGGTTCATTGCCTTCAGACATAGGTAACATTGGGAGGCTTAAATTGCTAAATCTTGGGATGAACAACTTATCAGGACAGATACCAAGTGAAATAATCAAGCTTAGTGGTTTGGAGTACTTGGACTTATCCGTCAACAATTTCAAGGGTAAGATCCCTGATAGGTTTCCATCAAGTCTAAAGCTATTCAACATCTCCTATAATGATCTATCAGGTCCTGTTCCTGAAGACTTGAGGAATTTTCCTATCACTTCATTTCGTCCTGGAAATGCCTTACTAATCTTGCCAAATGGCATGTCTTCCCAGAACAATGGTTCTGGAGGTTTTCATAATAGAGGGCACCACCACAGCTCGAAAGGTAGTATCAGAGTAGCAATTATTATTGCCTCTGTTGGGGCTGCCATGATGATTGCCTTTGTTTTACTGGCTTATTATCGGGCACAGTTTCATGAATTTCATGGAAGAAATGGTATTTGTGGCAAGACTACAGGAAGAGATGTTAACTTGGGAAGATTTACTCGGCCTTCCCTCTTCAAGTTCCAAAAAAATATTGACCCCCCTCCAACTTCATCGAGTTTTTCTAATGATCACTTGCTAACTTCAAATGCAAGATCAATGTCGGGGCAGAATGAGTTTGTTACTGAAATTTCAGAGCGTGGTTTACACGAGGAAAGAGAAGCAAGTGCAGAGTCTATGAAGCCGGGTGTACCTGTACCGGCCAATCCTCTAACCTCTGAATGGAGGACCTCTCCAGGGTCCCCCTTATCTTCGTCGCCCCATTTTATTGAGGCATGTGAGCAACCTGTGATGTTAAATGTCTACTCACCAGATCGATTGGCTGGAGAGCTGTTTTTCCTCGACAGTTCGGTAGTATTCACAGCTGAGGAACTGTCTCGTGCCCCAGCAGAAGTTCTTGGTAGAAGCAGCCATGGGACTTTATACAAGGCTACTCTAGATAGTGACCATATGTTGACTGTGAAGTGGTTGCGAGTAGGCCTTGTAAAGCATAAGAAAGAATTTGCAAAGGAAGCTAAAAAAATTGGATCTATTAGACATCCAAACATTGTTTCATTAAGAGCATATTATTGGGGGCCCAGGGAACAAGAAAGGTTGATTCTAGCAGATTATATCCATGGAGATAGCTTGTCCCTACATCTTTATGAGACCACACCTCGAAGATACTCCCCATTATCATTCAGCCAAAGACTGAAAATTGCAGTTGACGTTGCTCGGTGTTTGTATTACCTCCATGATAGAGGCATGCCTCATGGTAACCTAAAGCCAACCAATATACTGCTGGCTGGCCCTGATCTTAATGCTCGCCTCACTGATTATGGTCTGCACCGTCTCATGACACCTGCTGGCACTGCAGAACAGATTTTAAATTTGGGAGCACTTGGGTACAGCGCCCCAGAGCTTGCTACTGCAGCGAAACCATTCCCATCATTTAAGGCTGATGTTTATGCATTTGGGGTGATACTAATGGAGCTGTTAACAAGAAGAAGTGCTGGTGACATAATCTCTGGCCAGTCAGGTGCTGTTGATCTTACAGATTGGGTCCGGCTGTGTGCCCATGAAGGACGAGGAATAGAGTGCTTCGATAGAGATATTGCAGGTGGGCAGGAATCTCAAGAAGCGATAGATGAATTGCTTTCCATCTCGCTAAGATGTATACTTCCTGTCAATGAGAGGCCTAACATCAGAACAGTCTTTGAGGATCTGTGTTCCATATCTGTTTGA 3183 0.4326 MYLHPNLRFFLYSSFFVYGIVLGSSEDEVRSLLEFKKGIRDDPLDRVLNSWNRSLMVSNDCPRSWHGIECDDAGNVIAIVLEGLSLTGDLKFSTLNGLKMLRNLSLSGNFFTGRLVPTMGTLSSLQHLDLSRNQFYGPIPARINDLRGLNYLNLSSNNFTGGLPGGINNLQQLKVLDLHSNFLRGNIGDLLSELRNVEHIDLSCNVFYGGLSLDSENISSLANTVRHVNLSHNKLNGEFFSEDLIKLFRNLEVLDLGDNQLTGELPSIGSLPYLRVFRVGTNQLNGSIPEELFESSIPLEELDLSGNGFSGSIHSINSTNLKVLNLSSNVLSGSLPSTLGSCVMVDLSKNNISGDISAMENWGTNLKVIDLSANELSGSFPNLTSQFEMLISINIRSNALVGRLPLALGTSPRLSSVDLSLNELTGSIPSSFFTSLTLINLNLSGNNFTGPIPLQGSHTAELLVLPSYLPMESLDLSNNSLTGSLPSDIGNIGRLKLLNLGMNNLSGQIPSEIIKLSGLEYLDLSVNNFKGKIPDRFPSSLKLFNISYNDLSGPVPEDLRNFPITSFRPGNALLILPNGMSSQNNGSGGFHNRGHHHSSKGSIRVAIIIASVGAAMMIAFVLLAYYRAQFHEFHGRNGICGKTTGRDVNLGRFTRPSLFKFQKNIDPPPTSSSFSNDHLLTSNARSMSGQNEFVTEISERGLHEEREASAESMKPGVPVPANPLTSEWRTSPGSPLSSSPHFIEACEQPVMLNVYSPDRLAGELFFLDSSVVFTAEELSRAPAEVLGRSSHGTLYKATLDSDHMLTVKWLRVGLVKHKKEFAKEAKKIGSIRHPNIVSLRAYYWGPREQERLILADYIHGDSLSLHLYETTPRRYSPLSFSQRLKIAVDVARCLYYLHDRGMPHGNLKPTNILLAGPDLNARLTDYGLHRLMTPAGTAEQILNLGALGYSAPELATAAKPFPSFKADVYAFGVILMELLTRRSAGDIISGQSGAVDLTDWVRLCAHEGRGIECFDRDIAGGQESQEAIDELLSISLRCILPVNERPNIRTVFEDLCSISV* 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01626 1060 Gene3D Phosphorylase Kinase; domain 1 763 857 - -
Eupl13g01626 1060 Gene3D Ribonuclease Inhibitor 24 212 IPR032675 -
Eupl13g01626 1060 Pfam Leucine rich repeat N-terminal domain 26 71 IPR013210 -
Eupl13g01626 1060 Gene3D Ribonuclease Inhibitor 213 583 IPR032675 -
Eupl13g01626 1060 PANTHER OS07G0626500 PROTEIN 21 101 - -
Eupl13g01626 1060 Pfam Leucine Rich Repeat 320 342 IPR001611 GO:0005515
Eupl13g01626 1060 SUPERFAMILY RNI-like 103 551 - -
Eupl13g01626 1060 SUPERFAMILY Protein kinase-like (PK-like) 783 1055 IPR011009 -
Eupl13g01626 1060 ProSiteProfiles Protein kinase domain profile. 780 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01626 1060 FunFam Leucine-rich repeat receptor-like protein kinase 765 857 - -
Eupl13g01626 1060 ProSiteProfiles Leucine-rich repeat profile. 250 272 IPR001611 GO:0005515
Eupl13g01626 1060 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 240 463 - -
Eupl13g01626 1060 FunFam Nuclear pore complex protein NUP107 25 189 - -
Eupl13g01626 1060 Pfam Protein kinase domain 784 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01626 1060 FunFam Leucine-rich repeat receptor protein kinase EMS1 464 558 - -
Eupl13g01626 1060 Gene3D Transferase(Phosphotransferase) domain 1 859 1060 - -
Eupl13g01626 1060 FunFam Pollen receptor-like kinase 1 858 1060 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01626 Eupl-Chr13 34470240 34492594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01626 5 559 Receptor kinase-like Gene Family AT1G08590 32.415 4.38e-59 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl13g01626 Pkinase 4.3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01626 - - nnu:104600037 1551.18