Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01619 ATGGACCTGCATATGAATCCGAGACGACGATCCAGACAGTCTACTAAATACCTTGGTGTTCGACGAAGGCCATGGGGTCGATACGCTGCCGAGATTCGAAATCCGTTCACTAAGGAGAGACATTGGCTAGGTACATTTGACACTGCAGAGGAAGCCGCGTTAGCTTATGATCTTTCAGCTATCTCTTTCAGTGGGCTCGGTAGAGCTCGAACCAATTTTTATTACTCTTTCTTGGCACCTCCTCCACCTCCTACCCCGCCACTGCCGCCGCCTCCTCCACCATCGCCAGAGTTGGAAGAGAGTGACTACAATTGTGTAGAGTTGAATGCCATTGAAGACGATGAATCGATGACTATCGCTGCCATTTTACAGAGTTTTCGACACTAA 387 0.4884 MDLHMNPRRRSRQSTKYLGVRRRPWGRYAAEIRNPFTKERHWLGTFDTAEEAALAYDLSAISFSGLGRARTNFYYSFLAPPPPPTPPLPPPPPPSPELEESDYNCVELNAIEDDESMTIAAILQSFRH* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01619 128 FunFam ethylene-responsive transcription factor RAP2-11 15 75 - -
Eupl13g01619 128 Pfam AP2 domain 15 61 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 MobiDBLite consensus disorder prediction 80 98 - -
Eupl13g01619 128 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 95 - -
Eupl13g01619 128 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 CDD AP2 15 73 IPR001471 GO:0003700|GO:0006355
Eupl13g01619 128 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Eupl13g01619 128 MobiDBLite consensus disorder prediction 80 100 - -
Eupl13g01619 128 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01619 Eupl-Chr13 34340506 34341268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01619 3 76 AP2-EREBP Transcription Factor Family AT1G12890 68.354 1.93e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Eupl13g01619 AP2 2.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01619 - - egu:105056727 180.644