Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01603 ATGGATTTAGCTCGCAAAATTCATTGTATCGATCTCCGATCGAGTGGTTTCATCACTGGTTCCGCTATTTTAGATGCTCGAAAGACCAGTATTCAACCTCGTTTCAGGCCGATTTCAGCTTCTCTAACTCAGACCAGGAGATTTAACACCGAGAATTTAGTTCAATTTACTACTTCATTTAACCCTAGAAAGCAAAACCCTAGGGTTTCAACTAGGGTTTCGGCTGTTGCCGTTGAACCTGAAACTACTAATGTAGAAGATATAGAATCCCTGTTCTCGGAGAATTCTGTTGATGAGACTAATAAAAAACGTGGTAACAAACAGTCGGGTAGCGGTGCGTCGAGTGTTTCTTCGGGTGTTAGGTTAGAAAACATCAGTAAAAGATATAAAGGGGTGACTGTTCTGAAGGATGTGAGCTGGGAAGTGAAGAAAGGGGAGAAAGTAGGGTTAGTCGGGGTTAATGGTGCTGGGAAGACGACCCAATTGAGGATTATAACCGGGCAGGAGGAACCGGATTCAGGGAATGTAATTAAGGCGAAACCCAACATGCGAATTTCGTTCTTGAGTCAAGAATTTGAGGTTTCTCCGAGCAGGACGGTGAAGGAAGAGTTCATGAGTGCGTTCAAGGAGGAGATGGAGATTGCGGGGAGGTTGGAGAAGGTCCAGAAGGCGCTTGAGAATTCAGTGGAGGATTTGGGGTTGATGGGGAGGCTTTTGGATGAGATGGATTCGCTTCAAAGACGAGCACAGGCTGTTGATTTAGACGTGGTGGAAGTGAAAATCAATAAAATGATGCCTGAGCTTGGGTTCTCTCCAGAAGATTCTGATCGGCTGGTAGCATCCTTCAGTAGTGGGTGGCAGATGAGGATGTCTCTAGGGAAAATTCTACTTCAGAATCCAGATTTGTTACTTCTGGACGAGCCCACTAATCACCTCGATCTTGACACAATCGAGTGGCTTGAGGGTTATCTTAACAAGCAAGATGTGCCAATGGTCATCATATCTCATGACAGAGCTTTCCTTGATCAACTGTGTACAAAAATTGTGGAAACTGATATGGGTGTGTCCAAGACATATGAGGGGAATTATTCTCAGTACATCATTGCAAAGGCGGCATGGATTGAAGCTCAGTATGCTGCATGGGAGAAGCAGCAGAAGCAAATTGAGCATACAAAGGACATCATAACCAGGTTGAGTGCGGGAGCAAATTCTGGTCGTGCATCCTCTGCTGAAAAGAAGCTGGAAAAACTTCAAGAAGAGGACCAAATTGAGAAGCCGTTTCAACGGAAACAAATGAAGTTTAGATTCCCAGAGCGCGGAAGTAGTGGAAAATCTGTAGCAACTATTAGAAATCTAGAATTTGGCTATGAAGATAAGATGCTGTTTAACAAGGCAAATCTTACAATTCAGAGGGGTGAGAAAATTGCTATTATTGGCCCAAATGGATGTGGAAAGAGTACCTTGCTGAAACTGATTATGGGTTTAGAGAAGCCAATTGGAGGTGAAGTACTGATTGGGGATTATAATGTTCTCCCAAACTATTTTGAGCAGAACCAGGCTGAGGCACTTGATTTGGATAAAACAGTGCTCGAGACCGTGGAAGAAGTTGCAGAGGATTGGAGACTTGATGATATAAAGGGACTCCTTGGACGTTGCAATTTCAAGGCAGACATGCTTGATAGAAAGGTCTCCCTTTTGAGTGGTGGTGAGAAGGCACGTCTTGCCTTTTGCAAGTTCATGGTAAAACCTTCTACCTTGTTAGTCTTGGATGAACCAACCAACCATTTGGACATACCATCAAAAGAGATGCTTGAGGAGGCAATAACAGAGTACAAGGGCACCGTCATCACTGTTTCTCATGATCGATACTTCATAAAGCAAATAGTTAATAGAGTAATAGAGGTCAAGGACAGCAGTTTACAAGATTATGCAGGCGATTACAATTATTATCTGGAGAAGAACCTTGATGCAAGGGAGAGGGAGCTTGAACGTGAGGCGGAGCTTGAGGATAAGGCCCCTAAAGTAAAAGCCAAGTCTAAGATGTCGAAGGCTGAGAAGGAAGCCCAGAAGAAGCAAAAAAGGATGGCATTTCAGCAGGCGAAAGCAAAATCAAAAGGGTTGAAGAATTCAAAACGTTGGAACTGA 2145 0.4364 MDLARKIHCIDLRSSGFITGSAILDARKTSIQPRFRPISASLTQTRRFNTENLVQFTTSFNPRKQNPRVSTRVSAVAVEPETTNVEDIESLFSENSVDETNKKRGNKQSGSGASSVSSGVRLENISKRYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQLRIITGQEEPDSGNVIKAKPNMRISFLSQEFEVSPSRTVKEEFMSAFKEEMEIAGRLEKVQKALENSVEDLGLMGRLLDEMDSLQRRAQAVDLDVVEVKINKMMPELGFSPEDSDRLVASFSSGWQMRMSLGKILLQNPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIISHDRAFLDQLCTKIVETDMGVSKTYEGNYSQYIIAKAAWIEAQYAAWEKQQKQIEHTKDIITRLSAGANSGRASSAEKKLEKLQEEDQIEKPFQRKQMKFRFPERGSSGKSVATIRNLEFGYEDKMLFNKANLTIQRGEKIAIIGPNGCGKSTLLKLIMGLEKPIGGEVLIGDYNVLPNYFEQNQAEALDLDKTVLETVEEVAEDWRLDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYKGTVITVSHDRYFIKQIVNRVIEVKDSSLQDYAGDYNYYLEKNLDARERELEREAELEDKAPKVKAKSKMSKAEKEAQKKQKRMAFQQAKAKSKGLKNSKRWN* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01603 714 MobiDBLite consensus disorder prediction 662 694 - -
Eupl13g01603 714 Pfam ABC transporter 349 436 IPR032781 -
Eupl13g01603 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 428 651 IPR027417 -
Eupl13g01603 714 Pfam ABC transporter 135 310 IPR003439 GO:0005524
Eupl13g01603 714 SMART AAA_5 471 639 IPR003593 GO:0016887
Eupl13g01603 714 SMART AAA_5 144 354 IPR003593 GO:0016887
Eupl13g01603 714 MobiDBLite consensus disorder prediction 662 714 - -
Eupl13g01603 714 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 447 662 IPR003439 GO:0005524
Eupl13g01603 714 FunFam ABC transporter ATP-binding protein 407 675 - -
Eupl13g01603 714 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 378 IPR003439 GO:0005524
Eupl13g01603 714 Pfam ABC transporter 463 594 IPR003439 GO:0005524
Eupl13g01603 714 CDD ABCF_EF-3 448 637 - -
Eupl13g01603 714 MobiDBLite consensus disorder prediction 92 117 - -
Eupl13g01603 714 ProSitePatterns ABC transporters family signature. 566 580 IPR017871 GO:0005524|GO:0016887
Eupl13g01603 714 Gene3D - 409 675 IPR027417 -
Eupl13g01603 714 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 119 705 - -
Eupl13g01603 714 Gene3D - 117 403 IPR027417 -
Eupl13g01603 714 FunFam Putative ABC transporter ATP-binding component 121 405 - -
Eupl13g01603 714 Coils Coil 674 703 - -
Eupl13g01603 714 ProSitePatterns ABC transporters family signature. 282 296 IPR017871 GO:0005524|GO:0016887
Eupl13g01603 714 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 121 363 IPR027417 -
Eupl13g01603 714 CDD ABCF_EF-3 121 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01603 Eupl-Chr13 33904266 33912095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01603 449 664 Calmodulin-binding Proteins AT2G36910 26.860 7.34e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01603 - - nnu:104600004 1153.66