Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01598 ATGGGTTGGTCTTACCTTGTGGACTTATTCACCTTCTTGTTCAGATGTTACCCTGAAATCCTGTTAGCCATGGCTTGCTTCTTCTCTATGCACTTGTTGAGTCAAGCTTTACTGAGTAAAAAGAGCAGGGTCCTTGTGAATTGGCCCATTGTAGGAATGCTACCTTCCCTTCTCTGCAACGCCGATCGTTTGCACGATTGGACTACAGAAATCCTTACACGATGTGGCGGTACATTTTTATTTAGCGGCCCCTGGCTCACAGGCATTGAGACACTCGTTACGTGCGATCCTGCTAACGTGCACCACATTCTGATCACCAATTTCTCCAACTTCCCCAAGGGCTCCGATTATTACGAGATGCTTGATTTTCTCGGAGATGGGATCTTCAATGCAGACTCAGAGTCCTGGAGGCTACAAAGGAAAATAGCCCATGCCCACATGAACTCAATAAGGTTTCGTCGATATTTAGCTAAGACAAGTCAAGAAATCCTGGAGACGGGACTCATACCTGTTCTTTCCCATGTAGCTCACAAAGGAGATGTTGTGGACTTGCAAGATGTGTTGCTGAGATTCACGTTCGATAGTGCGTGTACATTGATTTTTGGAATCAATCCTAGATGTCTTTCTGTTAACTTCCCAACAATCCCTTTCATGAAAGCTATGGACGACGCGGAGGAGGCGATATTTTCTCGCTACGTTGTACCTGTGTGGTTGTGGAAGTTACAAAGGTGGTTACATGTAGGAAAGGAGAAGAAACTGGCTAAGGCTTGGAACACTGTCGACCATTTCATAGCTAAGTATATTTCAATTAGAAGAGAAGAACTAAAGGAACTTAAAGACATTGGAAAGGAGAAGGGTGTTGAGGAAGGGAAGGATTTATTAACTTTCTACATGGAATCCCAACTTCAAGATGAAATGGGTAGAATGAAATATGATAAGTTTCTTAGGGACACCACATTGAACTTGTTCATTGCTGGGAGGGGCACAACTAGTGCAACTCTTACTTGGTTCTTCTGGTTAGTGTCTACGAATCCAACTGTCGAAACAAAGATCCTGGAGGAGCTAAACACGAATTTACCACAAAATGATGAGAATCCACCAAACCAAAGTGTGTTCATCAATACTAATGTTCTCAGCAAATTGATTTATTTACATGCAACCTTTTGGGAGACTCTCAGACTTTTCCCACCTGTTCCATTTGATCAGAAGGGTGTCATGCAGCAAGAAGTTCTTCCAAGTGGGGACCTGGTACGACCAGGAAAGATGGTCATGTACATCATTTATGCAATGGGTAGGATGGAATGGATCTGGGGCAAAGACTGCTTGGAATTTAAGCCAGAGCGATGGATATCAGAGAGAGGACACCTGAAATTCGAACCTGCTCACAAGTTCTCGGCGTTTAACGCAGGACCAAGAATCTGCCTAGGTAAAGACATGGCTATGACTCAAATGAAGGCTGTTGCAGCCTCTGTGCTTTATAATTTCCATGTTGAAGTGTTGGGAGACCACCCTGTATTCCCTAGGACTTCACTGCTACTCTTCATGAAGCATGGTTTGAAGGTTAGGGTCAGAACAAGATGCGTGTGA 1587 0.4386 MGWSYLVDLFTFLFRCYPEILLAMACFFSMHLLSQALLSKKSRVLVNWPIVGMLPSLLCNADRLHDWTTEILTRCGGTFLFSGPWLTGIETLVTCDPANVHHILITNFSNFPKGSDYYEMLDFLGDGIFNADSESWRLQRKIAHAHMNSIRFRRYLAKTSQEILETGLIPVLSHVAHKGDVVDLQDVLLRFTFDSACTLIFGINPRCLSVNFPTIPFMKAMDDAEEAIFSRYVVPVWLWKLQRWLHVGKEKKLAKAWNTVDHFIAKYISIRREELKELKDIGKEKGVEEGKDLLTFYMESQLQDEMGRMKYDKFLRDTTLNLFIAGRGTTSATLTWFFWLVSTNPTVETKILEELNTNLPQNDENPPNQSVFINTNVLSKLIYLHATFWETLRLFPPVPFDQKGVMQQEVLPSGDLVRPGKMVMYIIYAMGRMEWIWGKDCLEFKPERWISERGHLKFEPAHKFSAFNAGPRICLGKDMAMTQMKAVAASVLYNFHVEVLGDHPVFPRTSLLLFMKHGLKVRVRTRCV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01598 528 PANTHER CYTOCHROME P450 36 521 - -
Eupl13g01598 528 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS E-class P450 group I signature 464 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS E-class P450 group I signature 474 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 SUPERFAMILY Cytochrome P450 47 526 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 CDD CYP86A 79 519 - -
Eupl13g01598 528 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS P450 superfamily signature 465 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS P450 superfamily signature 474 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 467 476 IPR017972 GO:0005506|GO:0016705
Eupl13g01598 528 Gene3D Cytochrome P450 35 527 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl13g01598 528 Pfam Cytochrome P450 47 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01598 Eupl-Chr13 33819892 33821478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01598 19 528 Cytochrome P450 AT4G39490 45.560 9.99e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01598 - - msin:131218542 635.95