Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01594 ATGGAAGAGTCTCATGTTGAATCATTGCTGGGAGGCCGTGCGAGGTCGGCATCGGATTCTGACTCGTCTTCGGGAAATATCCAGTTTGCTCAAGGAAAGGACAACCTGCGACCTCCTCGAAATTCCAACAAGAACAAGTCGGAGCTGCTGTGTACTTCTTTCGCTACAACGGGGTCATGCACATATGGCACAAAATGCCGTTATATTCACTACGTTCCAGTAGAAGCGAAAACAACATCAACAATCAAAGTGGAACAAGCGAACAACACAAAGGAATGGTCGCCAGCAGATGATGGCATTGAAGTTCGTATACCCCCACAAGCGAATAACACAAAGGAATGGTCGTCGGCAGATGATGGCATTGAGGTTCGTATACCCCCACAAGCGAATAACACAAAGGAATGGTCGCCAGCAGATGATGGCATTGAAGTTCGTATACCCCCACAAGCGAATAACACAAAGGAATGGTTGCCGGCAGATGCTGGCATTGAAGTTTGTATACCTACTTCATCGACCCCAACAACGGATGAAGTTAATGCTTATATCAATAAGGTCATCTATGGCCCTAGTCGACCAAGACGGAGATTGCCAGTTTTCCAAGAAATTTGCCCAGACGAAACAGACTAA 627 0.4657 MEESHVESLLGGRARSASDSDSSSGNIQFAQGKDNLRPPRNSNKNKSELLCTSFATTGSCTYGTKCRYIHYVPVEAKTTSTIKVEQANNTKEWSPADDGIEVRIPPQANNTKEWSSADDGIEVRIPPQANNTKEWSPADDGIEVRIPPQANNTKEWLPADAGIEVCIPTSSTPTTDEVNAYINKVIYGPSRPRRRLPVFQEICPDETD* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01594 208 Gene3D - 30 76 - -
Eupl13g01594 208 Pfam CCCH-type zinc finger 50 70 IPR041367 -
Eupl13g01594 208 ProSiteProfiles Zinc finger C3H1-type profile. 45 73 IPR000571 GO:0046872
Eupl13g01594 208 MobiDBLite consensus disorder prediction 1 46 - -
Eupl13g01594 208 MobiDBLite consensus disorder prediction 15 46 - -
Eupl13g01594 208 SUPERFAMILY CCCH zinc finger 49 72 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01594 Eupl-Chr13 33741057 33742293 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl13g01594 zf-CCCH_4 4.5e-07 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01594 - K18753 aew:130755182 107.842