Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01593 ATGGAGGCATTCAATTCGAATATAACGGAGAGCAGGCTGAGGCTGAGCAGAGGTGCCTCTCAGTTCGATCCACAGACCGACCCCCAATTAATACGCAGCAGATCTGGATATTCCTTCGCAAGCCCCACATTAGATTCTCCAACGTCTGATCCTCTCGTTAGGGATTCCACACTGATCCGGTACTATCGCGCAGTAGCCGAAACCGCAATGACAGCCGCAGCCGCAGTCGCAGCTGGGTTCGTTCCACCGTTTGTCGACGTGCTTAGATCACCAGCCTTTTATTCAGGCGAGATTTATCGGCTGTTTCTCCGCCAACGGTTCCTTCAACACCTGATCAACAACTCGTCGTCCTCTCGCGGCTTTTCGTCGTCTCCTGTATACCCCGGATCGTCTTCGGCTAATAGCCTGTACAACAGTACAGGACGGAGATTTGTCGATCGTGGGAGGCCTTCGGTAGCTGCTCAAACGGCGACTGGTGCGAGTTCTCTCGCCTCATCTTTTCCGCGCGACGATCTGCGACTGTACTCAAGGACAAACGACACCAAGGTGTGCAGGCATTTTGCTAGAAGGAGGTCATGCCCATATGGCCCAGCATGTCATTTCATTCACAACGTTGCAGCAGTGGCCCAAACAACATCAACAATTAAGGTGGAACAAGGTAGCAGCAGTGTCGATTATTGGTCACCGACAGACGACAACATTGAGGTTTGGTGGTCGACGACACACGCCAACAATAAGGTTCTGTTAACTCCTTTGTCAACTGAGGATTCACCGGCAAGGGAAATAGTTAATGCTTACATCAATCACGTCATCTACGGTCCACGTCTTAGACGGAGATTGCCAATTTTCTATGCAATTTGCTGA 864 0.5081 MEAFNSNITESRLRLSRGASQFDPQTDPQLIRSRSGYSFASPTLDSPTSDPLVRDSTLIRYYRAVAETAMTAAAAVAAGFVPPFVDVLRSPAFYSGEIYRLFLRQRFLQHLINNSSSSRGFSSSPVYPGSSSANSLYNSTGRRFVDRGRPSVAAQTATGASSLASSFPRDDLRLYSRTNDTKVCRHFARRRSCPYGPACHFIHNVAAVAQTTSTIKVEQGSSSVDYWSPTDDNIEVWWSTTHANNKVLLTPLSTEDSPAREIVNAYINHVIYGPRLRRRLPIFYAIC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01593 287 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 180 204 IPR000571 GO:0046872
Eupl13g01593 287 ProSiteProfiles Zinc finger C3H1-type profile. 178 206 IPR000571 GO:0046872
Eupl13g01593 287 SUPERFAMILY CCCH zinc finger 179 206 IPR036855 GO:0046872
Eupl13g01593 287 Gene3D - 176 208 - -
Eupl13g01593 287 SMART c3hfinal6 180 205 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01593 Eupl-Chr13 33723838 33727798 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl13g01593 zf-CCCH 9.6e-09 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01593 K18753 - nnu:104599994 95.9005