Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01578 ATGTCCGACTCCACTACTTCCCTAGCAATAAACTTCCCTGAAAACCCTAATCCCAACCCTAATTACACTTATCTAATGGATCATCTTGGCCAACCGGAATTCGAATTTTCCGATTATCTGATGCTCGAAGATCGATCGGAGGAAGATTTGACGTCTACCCACATCGGATGTCTTTCGAAGAATCCAATTTCGTCGGAAACGATCGATGATTCAATTCAATGCAATGGCGACACACCTAGAAGAAGTGACATGCACTTAAAATGTAAGAGAGGATTGAAGAAAATTAAGATGGATGTTGGGTTTAGAATTGCATTTCGAACGAAATCCGCGCTCGAAATCATGGACGACGGATTCCGGTGGAGGAAGTATGGGAAGAAGATGGTCAAGACCAGCCCAAATCCAAGGAATTACTACCGTTGTTCAAATGGAGATTGCCATGTGAAGAAAAGAGTGGAGAGAGACCCTGAAGACTCAAGCTATGTGATAACGACATATGAGGGTGTGCACAACCATGAAAGCCCATGTGTGGTTTATTACAATCAAATGCCTTTGATGGTTCCTAATGGATGGACTCTGCAAGCTTCTCACTCATCTTCATGA 600 0.43 MSDSTTSLAINFPENPNPNPNYTYLMDHLGQPEFEFSDYLMLEDRSEEDLTSTHIGCLSKNPISSETIDDSIQCNGDTPRRSDMHLKCKRGLKKIKMDVGFRIAFRTKSALEIMDDGFRWRKYGKKMVKTSPNPRNYYRCSNGDCHVKKRVERDPEDSSYVITTYEGVHNHESPCVVYYNQMPLMVPNGWTLQASHSSS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01578 199 SMART WRKY_cls 114 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01578 199 FunFam WRKY transcription factor 57 100 174 - -
Eupl13g01578 199 Pfam WRKY DNA -binding domain 115 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01578 199 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 71 175 IPR044810 GO:0003700
Eupl13g01578 199 SUPERFAMILY WRKY DNA-binding domain 107 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01578 199 Gene3D WRKY domain 101 167 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01578 199 ProSiteProfiles WRKY domain profile. 109 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01578 Eupl-Chr13 33432319 33434118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01578 17 184 WRKY Transcription Factor Family AT5G64810 46.591 9.64e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl13g01578 WRKY 5.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01578 - - nnu:104599987 280.796