Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01556 ATGGAGCAAGAGAGTCAGAAAAGGGAAGTTGAAGAAACTGGCTGCCAATCGCCGAATGCTCCTATACTCTGTGTGAATAACTGTGGGTTCTTTGGAACTGCTGCAACCAACAATCTCTGCTCGAAATGCTACAGAGATTTGTTTTTGAAGCAATCCAAGGCTTCTGCCGTTACTGTTGTCGCAGAGAAGAAAGTTGATGAACTCGTTACAGAAACGTGTCATGTTTTAGAGGATCAAAAAGCTAAAACTACTCCTATTGAGGAAGGGACCACTTCTGAAGATCCAGGGAAGCAACCTGCTAACCGTTGCAGCTTCTGTAGGAAGCGTGTTGGACTGACCGGCTTCAAGTGCCGATGTGGTCAGATGTTTTGCTCTCTTCATCGCTATTCTGACAAACACAATTGCCTCTTCGATTACAAAAGCACTGGCCAGGATGCAATTGCCAAAGCAAATCCTGTTGTGAAGGCTGACAAGGTTGAGAAGATCTGA 489 0.4519 MEQESQKREVEETGCQSPNAPILCVNNCGFFGTAATNNLCSKCYRDLFLKQSKASAVTVVAEKKVDELVTETCHVLEDQKAKTTPIEEGTTSEDPGKQPANRCSFCRKRVGLTGFKCRCGQMFCSLHRYSDKHNCLFDYKSTGQDAIAKANPVVKADKVEKI* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01556 162 Gene3D - 1 66 - -
Eupl13g01556 162 PANTHER AN1-TYPE ZINC FINGER PROTEIN 20 162 - -
Eupl13g01556 162 FunFam Zinc finger AN1-type containing 6 76 158 - -
Eupl13g01556 162 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 65 - -
Eupl13g01556 162 Pfam A20-like zinc finger 22 45 IPR002653 GO:0003677|GO:0008270
Eupl13g01556 162 Gene3D - 77 158 IPR035896 -
Eupl13g01556 162 SMART A20_3 21 45 IPR002653 GO:0003677|GO:0008270
Eupl13g01556 162 Pfam AN1-like Zinc finger 103 140 IPR000058 GO:0008270
Eupl13g01556 162 ProSiteProfiles Zinc finger A20-type profile. 18 52 IPR002653 GO:0003677|GO:0008270
Eupl13g01556 162 ProSiteProfiles Zinc finger AN1-type profile. 97 143 IPR000058 GO:0008270
Eupl13g01556 162 SMART AN1_Zf_4 103 140 IPR000058 GO:0008270
Eupl13g01556 162 SUPERFAMILY AN1-like Zinc finger 88 157 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01556 Eupl-Chr13 32804662 32806280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01556 11 162 C2H2 Transcription Factor Family AT3G52800 45.238 1.52e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01556 - - nnu:104605500 271.552