Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01554 ATGTACGTGGGCTTCTCTGCTTCCACTGGTCTGCTCACAGCTGCACATAATGTGCTTCGGTGGAGTTTCAAGATTGGCGGGAAGGCTCAGGATTTAGATCCATCGGAGCTCCCATCTCTTGTGAAACCCCAAAAGGTGGTGCATAAAAAAGGCTTCGCTGTGGGGATAGCTTTGGCTTGTGTCACTCTGGTTTTGTTGGTGATATCAGGTGCACTCCAGGTGGTACAAAGGAGGAAGCATGGCGATGACGTCTTAGAAGAGTGGGAAGTAGAGTATGGAGCTCGAAGATTCGAATACTCTGAGCTCTTGGCTGCAACTGGGGGATTTGGTGAGCAAAACCTTATTGGCACTGGAGGATTTGGAAGTGTCTATAAGGGAGTTATTCCTAGCACAGGCCTCGAAGTGGCGATCAAGCGAGTTGCTCATGACTCGAGGCAGGGGATGAGAGAGTTTGTGGCAGAGATAACAAGCATGGGAAGGCTTAGACATCGGAATCTAGTGCAGTTACATGGCTGGTGCAGAAGGAAAGATGAACTCCTCCTTGTTTATGACCATGTCCCAAATGGAAGCCTCGACAAACTTTTGTTCAACAATCCGAAGATCCTAACTTGGGAACAAAGATATAGGATCTTGATTGGGGTTGCCCGAGCCTTGTTGTATCTCCACGAAGAATGTGACCAGAGGGTCGTGCACCAAGATGTGAAGCCGAGTAACATCCTCATAGATGCAGATCTCAATGCCAAGCTCAGGGATTTTGGCCTCGCCAGGATATTTGATCATGACAACAATCCTCAGACAACCCATATTGTAGAGACTCTTGGCTACCTTGCTCCTGAGCTCACTAGGACTGGGAGAGCCACAACGTACACAGTCGTTTATGGTTTTGGTGCACTTATGCTCGAAGTGGCTTGCGGGAGGAGGCCCATTGAGCCCCGAAAGAATGCTCAGGAGTTGGTATTAGTGGATTGGGTTAGAGAACTACATTCCAGAGGAGAGATCATGAAAGCCATTGACCCCGTGTTGGACTTCTACAACACGAAGCAGAGCTCGTTCTTAGTCTTGGCTTGCTATGTTCCCATCCCCTCCCCATTTACAGACCTAGTATGA 1107 0.4869 MYVGFSASTGLLTAAHNVLRWSFKIGGKAQDLDPSELPSLVKPQKVVHKKGFAVGIALACVTLVLLVISGALQVVQRRKHGDDVLEEWEVEYGARRFEYSELLAATGGFGEQNLIGTGGFGSVYKGVIPSTGLEVAIKRVAHDSRQGMREFVAEITSMGRLRHRNLVQLHGWCRRKDELLLVYDHVPNGSLDKLLFNNPKILTWEQRYRILIGVARALLYLHEECDQRVVHQDVKPSNILIDADLNAKLRDFGLARIFDHDNNPQTTHIVETLGYLAPELTRTGRATTYTVVYGFGALMLEVACGRRPIEPRKNAQELVLVDWVRELHSRGEIMKAIDPVLDFYNTKQSSFLVLACYVPIPSPFTDLV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01554 368 ProSiteProfiles Protein kinase domain profile. 109 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01554 368 Gene3D Transferase(Phosphotransferase) domain 1 186 361 - -
Eupl13g01554 368 Pfam Legume lectin domain 1 38 IPR001220 GO:0030246
Eupl13g01554 368 PANTHER - 1 357 - -
Eupl13g01554 368 FunFam serine/threonine-protein kinase PBS1-like 75 185 - -
Eupl13g01554 368 SUPERFAMILY Protein kinase-like (PK-like) 86 343 IPR011009 -
Eupl13g01554 368 Gene3D - 1 44 - -
Eupl13g01554 368 Pfam Protein kinase domain 111 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01554 368 SMART serkin_6 109 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01554 368 Gene3D Phosphorylase Kinase; domain 1 94 185 - -
Eupl13g01554 368 FunFam L-type lectin-domain containing receptor kinase S.4 186 362 - -
Eupl13g01554 368 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Eupl13g01554 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Eupl13g01554 368 SUPERFAMILY Concanavalin A-like lectins/glucanases 1 131 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01554 Eupl-Chr13 32787526 32788632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01554 1 341 Receptor kinase-like Gene Family AT3G53810 54.519 2.72e-131 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl13g01554 Pkinase 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01554 - - tss:122667419 551.206