Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01552 ATGTCCTCCTCTTCCCAACTTATGCTTAACCAGGGCATATTGGAGGATCAAGAGATGCGCTCTCACATAGGATTCTACACACACGGCTCTTCTATCCCTCCCAGTAACTGGACCTTCCCTACATCTGGGTGTCTTCAGCCTCTCAGTGAAGTCCTCTCTTCCACAGCTCCAAAACCCAGAGACTTTACATCCCATCTTGGGGAATTTGAAGCTCCTTTAGTGCAGAGATCGGCTACCAATCAATGTCCGTGGGGAGAACTGGATGTCTGGTTGGGAAATAAGAGAAGTGTCAGAGATGATCATCTGAGTATTGCTGCAATGAAGATGAAGAAGGTGAAGGTAAAAAGGAAGGTGAGGGAACCCAGGTTTTGCTTCAAAACCATGAGCAACGTGGATGTCTTGGATGATGGTTATAAATGGAGGAAGTACGGTCAGAAAGTGGTGAAGAACACGCAGCATCCAAGGAGTTACTACCGCTGTACACAAGACAACTGTTGTGTGAAGAAGCGAGTGGAGCGATTAGCGGAGGACCCGCGGATGGTGATCACAACGTACGAAGGGAGACATGCACATTCTCCATTGCATGATCCGGATGACTCCCAAGTTTCATCCCAAATTAACAATCTCTTCTGGTAG 636 0.4748 MSSSSQLMLNQGILEDQEMRSHIGFYTHGSSIPPSNWTFPTSGCLQPLSEVLSSTAPKPRDFTSHLGEFEAPLVQRSATNQCPWGELDVWLGNKRSVRDDHLSIAAMKMKKVKVKRKVREPRFCFKTMSNVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCCVKKRVERLAEDPRMVITTYEGRHAHSPLHDPDDSQVSSQINNLFW* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01552 211 Gene3D WRKY domain 121 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01552 211 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 101 194 IPR044810 GO:0003700
Eupl13g01552 211 SUPERFAMILY WRKY DNA-binding domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl13g01552 211 MobiDBLite consensus disorder prediction 189 211 - -
Eupl13g01552 211 SMART WRKY_cls 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01552 211 Pfam WRKY DNA -binding domain 135 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl13g01552 211 MobiDBLite consensus disorder prediction 197 211 - -
Eupl13g01552 211 FunFam WRKY transcription factor 57 120 193 - -
Eupl13g01552 211 ProSiteProfiles WRKY domain profile. 129 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01552 Eupl-Chr13 32767958 32776650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01552 104 211 WRKY Transcription Factor Family AT4G39410 72.566 1.20e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl13g01552 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01552 - - ming:122067004 293.893