Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01546 ATGAAAACTCTGTATAGGTTCCTCTCACAGTCCATGGAGTTGCAGAAGCTCTTCTTCTACTTCTCTGTTACTCTTCTTGCCGTAAAAGCTTCACCGGCGGCCAGTAACGGAGCTTCTCAAGACGCATATCTGTTGCTTTCCTTCAAAGGTACGCTTCCAAACCCTGGAGTTCTCCAAAACTGGCAGCAGAACCAGGACCCTTGCTCTTTCAGTGGAGTTTCATGTAAGGAATCTCGAGTTTCAGCTCTGGACCTAATTGATGTACCTTTGAGCTCGGAATTTTCGTCTGTTTCTTCGTTTCTGTTGAGTTTAGAACATTTGGAGAGGTTGTCGCTCAAATCCACAAATCTTACTGGAAATCTTTCCTCGGCTTCGGGATCTCGTTGTAGTAAGGTGTTGAGCGAGCTGAATCTGGACGGGAACAGTTTGTCCGGTTCGGTTTCGGATATTTTGAGCTTGGCTTCATGTTCGAGCTTGAAATCTCTAAACTTGTCTAGAAATTTCATCGGTTTCTCGATCGGAGCGAAGGATTTTGGTGGTCTGCGACTCGATTTGCAGTCGCTTGATCTCTCTTTTAATCAAATTTCCGGTCAAGACGTCGTTCCATGGCTTCTTTCGGGTGGTTGTACTGAGCTCAAGTACTTGGATTTGGCGGGAAACAACATCTCCGGGAATATTCCGGTATATAATTGCCGGAGTTTGGAGCATCTCGATCTGTCGTCAAACAATTTCTCAGGGGGAATTCCGTCTTTTGGAGATTGCACCACCTTGCAGCATCTGGATCTTTCGGCGAATAAATTTTCCGGCGATATTGGTGTCGGCTTAGTCGGATGTCAGCATCTAAGCTTCTTAAATCTCTCCTATAACAAGTTTTCGGGCAAAATTCCTTCTCTTCCGAGCAGAAGTTTGCAGTATCTTTTGCTCTTCTCCAACAATTTCCAAGGCGAGATACCTCTGCAACTCGGCGATGCTTGCTCGACTCTCGTCGAGCTCGATCTTTCCTCAAATAACTTGTACGGTATGGTGCCTAGTAATTTGGGTTCTTGTTCTTCTTTGGAATCTATTAATATCTCCAACAACAACTTCTCTGGTGAATTCCCAAGTGAAACTCTTGTCAACATTACTAGTTTGAAAAACCTCGTTCTGTCTTACAATAACTTCGTTGGTGTTTTACCGGATTCTTTGTGGAAGCTCAAGAATTTGGAGTTGTTAGATTTGAGTTCTAATAACTTTTCTGGATTGATCCCTTCACGCCTGTGTCAATATCCTAAAAAGAGCTTAAAGGAGCTGTATCTTCAGAACAATCTGTTCATGGGCACCATTCCTGCAACTCTCAGTAACTGCTCTCAATTAGTATCACTTGATCTCAGCTTCAATTACCTTACGGGGACAATTCCTTCCAGCTTGGGATCACTATCTCAGCTTCGCGATCTGAGAATGTGGTTGAATCAGCTTCATGGCGACATTCCGGAACAGCTCATGTACATTCGAACACTTGAAAACCTGATCCTAGACAATAACAGATTGACTGGAACGATTCCCTCTGGTTTAAGCAACTGTACTAATCTGAATTGGATCTCATTGTCAACCAATCAATTGACTGGCGAGATTCCAGGATGGATTGGTCGGCTTAATAATTTGGCAATCCTCAAGCTTGGAAACAACTCACTCTCTGGTAAGATCCCGCCAGAACTTGGAGATTGCCGGAGCTTGATATGGTTGGATCTTAATAACAATCTCTTAAGTGGGACTATTCCTCCTACCCTCTCAAAGCAATCTGGCAAAATTGCAGTTGGGTTGATTACAGGTAAGAGCTTTGTGTATCTGAAGAATGACATGAGTATTGACTGCCGTGGAGCTGGAAACCTCTTCGAGTTTGCTGGAATCAGACAGGATGGATTAAACAGGGTACCCACCTGGGGCTCTTGCAACTTCACTAGAGCCTACAAGGGTTTAACTCGATACACATTCAACAACAACGGCTCGATGATTTTTCTCGATCTGTCTTACAATATGTTGGAGGGTAGTATTCCGAACGAGCTTGGGGACATGTACTATCTGTCTGTTCTGAATCTAGGCCACAACAATCTCTCTGGTCCCATCCCATACAACCTGGGAAGCTTGAAGAATGTTGGGATTCTTGATCTCTCCCACAATAAACTCGAAGGACTAATACCTGGTTCCTTAATTAGCCTCACTATGCTTAGCGACATGGATCTTTCAAACAACCACCTCTCTGGACCGATCCCTCAATCTGGTCAGTTAGGAACTTTCAAACCTTACAGATATGAGAACAACACGGGCCTGTGTGGGATCCCTCTCCCTCCTTGTGGAGGGAATTCTGGTCTGAATTCGTCGAACTTCCAGCATCATAAATCTCACCGAAAACAAGCATCCCTGGCTGGTAGTGTGGCAATGGGTTTGTTGTTCTCCCTCTTCTGTATCTTTGGTTTGATTATTGTCATTGTGGAGAGCAAGAAGAGGAAGAAGAAGGACACATCCCTAGATGTTTACATTGATAGCAGGTCCCACTCGGGCACCGGCAATGTGAGCTGGAAGCTAACTGGCGTTCGAGAAGCCCTGAGCATCAACCTTGCTACCTTTGAGAAGCCCCTTCGGAAGCTCACCTTTGCTGACTTGCTCGAAGCCACCAATGGTTTCCACAACGACAGTCTCGTCGGCTCAGGCGGCTTTGGAGACGTCTACAAAGCGCAACTCAAGGATGGGAGCGTCGTAGCCATCAAGAAACTTATCCACATTAGTGGACAAGGAGACCGAGAATTCACAGCTGAAATGGAGACCATTGGAAAGATCAAGCACCGAAACCTCGTCCCTCTTTTGGGCTACTGCAAAGTCAGGGAAGAACGACTCTTGGTCTATGAATACATGAGATTCGGCAGCTTAGATGACATTCTACATGATCGGAGGAAGTCTGGAATCAAACTGAATTGGGCGGCGAGGAGAAAGATTGCACTTGGTTCCGCAAGGGGCTTAGCTTTCCTTCACCATAGTTGCATTCCACACATAATTCACAGAGACATGAAGTCGAGCAATGTTTTGCTCGACGAGGATTTAGAAGCTCGGGTATCAGATTTCGGGATGGCAAGGTTAATGAGTGCAATGGACACCCATCTTAGCGTCAGCACCCTTGCTGGCACTCCTGGTTATGTCCCACCGGAATACTACCAAAGCTTCCGATGCTCTACCAAAGGAGATGTCTACAGTTATGGGGTAATCCTGCTCGAGCTGCTCACCGGTAAACAGCCAACAGATTCGATCGACTTTGGAGACAATAACCTAGTGGGGTGGGTGAAGCAGCACGCGAAGCTGAAAATAAGCGACATTTTCGATCCAGAACTCATGAAAGAGGACCCAAGCTTGGAGATTGAGCTACTACAACACCTAAAGGTGGCATGTGCCTGCTTAGACGATCGACCATGGCGACGACCGACTATGATAGAAGTCATGGCAAAGTTCAAGGAAATTCAAGCAGGGAGCGGCGTCGACAACTCATCTGCCACCGACGTCGGGAGTTTCGGTGCAGTTGAAATGGTGGAGATGAGCATTAAGGAAGGTCCTGAGCTAAGCAAGCTGTAG 3597 0.4593 MKTLYRFLSQSMELQKLFFYFSVTLLAVKASPAASNGASQDAYLLLSFKGTLPNPGVLQNWQQNQDPCSFSGVSCKESRVSALDLIDVPLSSEFSSVSSFLLSLEHLERLSLKSTNLTGNLSSASGSRCSKVLSELNLDGNSLSGSVSDILSLASCSSLKSLNLSRNFIGFSIGAKDFGGLRLDLQSLDLSFNQISGQDVVPWLLSGGCTELKYLDLAGNNISGNIPVYNCRSLEHLDLSSNNFSGGIPSFGDCTTLQHLDLSANKFSGDIGVGLVGCQHLSFLNLSYNKFSGKIPSLPSRSLQYLLLFSNNFQGEIPLQLGDACSTLVELDLSSNNLYGMVPSNLGSCSSLESINISNNNFSGEFPSETLVNITSLKNLVLSYNNFVGVLPDSLWKLKNLELLDLSSNNFSGLIPSRLCQYPKKSLKELYLQNNLFMGTIPATLSNCSQLVSLDLSFNYLTGTIPSSLGSLSQLRDLRMWLNQLHGDIPEQLMYIRTLENLILDNNRLTGTIPSGLSNCTNLNWISLSTNQLTGEIPGWIGRLNNLAILKLGNNSLSGKIPPELGDCRSLIWLDLNNNLLSGTIPPTLSKQSGKIAVGLITGKSFVYLKNDMSIDCRGAGNLFEFAGIRQDGLNRVPTWGSCNFTRAYKGLTRYTFNNNGSMIFLDLSYNMLEGSIPNELGDMYYLSVLNLGHNNLSGPIPYNLGSLKNVGILDLSHNKLEGLIPGSLISLTMLSDMDLSNNHLSGPIPQSGQLGTFKPYRYENNTGLCGIPLPPCGGNSGLNSSNFQHHKSHRKQASLAGSVAMGLLFSLFCIFGLIIVIVESKKRKKKDTSLDVYIDSRSHSGTGNVSWKLTGVREALSINLATFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVREERLLVYEYMRFGSLDDILHDRRKSGIKLNWAARRKIALGSARGLAFLHHSCIPHIIHRDMKSSNVLLDEDLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVILLELLTGKQPTDSIDFGDNNLVGWVKQHAKLKISDIFDPELMKEDPSLEIELLQHLKVACACLDDRPWRRPTMIEVMAKFKEIQAGSGVDNSSATDVGSFGAVEMVEMSIKEGPELSKL* 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01546 1198 Gene3D - 599 659 - -
Eupl13g01546 1198 ProSiteProfiles Protein kinase domain profile. 887 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01546 1198 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Eupl13g01546 1198 Gene3D Ribonuclease Inhibitor 45 777 IPR032675 -
Eupl13g01546 1198 FunFam Brassinosteroid LRR receptor kinase 963 1164 - -
Eupl13g01546 1198 SMART LRR_typ_2 398 422 IPR003591 -
Eupl13g01546 1198 SMART LRR_typ_2 544 568 IPR003591 -
Eupl13g01546 1198 SMART LRR_typ_2 496 520 IPR003591 -
Eupl13g01546 1198 SMART LRR_typ_2 374 397 IPR003591 -
Eupl13g01546 1198 SMART LRR_typ_2 708 731 IPR003591 -
Eupl13g01546 1198 SMART LRR_typ_2 732 755 IPR003591 -
Eupl13g01546 1198 Pfam Leucine rich repeat 351 411 IPR001611 GO:0005515
Eupl13g01546 1198 Pfam Leucine rich repeat 497 557 IPR001611 GO:0005515
Eupl13g01546 1198 Pfam Leucine rich repeat 687 745 IPR001611 GO:0005515
Eupl13g01546 1198 SUPERFAMILY L domain-like 68 361 - -
Eupl13g01546 1198 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Eupl13g01546 1198 SUPERFAMILY Protein kinase-like (PK-like) 873 1162 IPR011009 -
Eupl13g01546 1198 CDD STKc_IRAK 893 1162 - -
Eupl13g01546 1198 Pfam Leucine rich repeat N-terminal domain 39 75 IPR013210 -
Eupl13g01546 1198 SMART serkin_6 887 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01546 1198 FunFam serine/threonine-protein kinase BRI1-like 2 848 962 - -
Eupl13g01546 1198 FunFam Inactive leucine-rich repeat receptor-like protein kinase 391 491 - -
Eupl13g01546 1198 Pfam Leucine Rich Repeat 233 250 IPR001611 GO:0005515
Eupl13g01546 1198 Pfam Brassinosteroid receptor island domain 594 658 IPR045381 -
Eupl13g01546 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 493 585 - -
Eupl13g01546 1198 Pfam Protein kinase domain 887 1157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01546 1198 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 656 775 - -
Eupl13g01546 1198 SUPERFAMILY RNI-like 276 589 - -
Eupl13g01546 1198 SUPERFAMILY L domain-like 653 777 - -
Eupl13g01546 1198 Gene3D Phosphorylase Kinase; domain 1 850 962 - -
Eupl13g01546 1198 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 100 373 - -
Eupl13g01546 1198 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 303 1156 - -
Eupl13g01546 1198 Gene3D Transferase(Phosphotransferase) domain 1 963 1164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01546 Eupl-Chr13 32620464 32626094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01546 19 1194 Receptor kinase-like Gene Family AT4G39400 65.497 0.0 1476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Eupl13g01546 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01546 K13415 - nnu:104605494 1831.22