Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01540 ATGCCAGTTCAACGCGAAAGCACAATACAAGGCACAATTGATTTCGTATTTGGAAACACCCCTGCCGTCTTCCAGAACTGCCTTGTCCTTGTCCGCAAACTGAACCAGTCAAAAGAACATGATCACAGCTTAGGGGAGAGAAGACTCAAATCAGAACACTGGCATCTCATTACAGAATTGCACTATTGTAGCTGCACCAGACCTTATGGCAGTTGGGGAAGGCAGCTTTTCGATGTTCCTGGGTGGACCATGGAAGAACCAGTCTAG 267 0.4719 MPVQRESTIQGTIDFVFGNTPAVFQNCLVLVRKLNQSKEHDHSLGERRLKSEHWHLITELHYCSCTRPYGSWGRQLFDVPGWTMEEPV* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01540 88 SUPERFAMILY Pectin lyase-like 5 35 IPR011050 -
Eupl13g01540 88 Gene3D - 3 53 IPR012334 -
Eupl13g01540 88 Pfam Pectinesterase 5 39 IPR000070 GO:0030599|GO:0042545
Eupl13g01540 88 ProSitePatterns Pectinesterase signature 2. 9 18 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01540 Eupl-Chr13 32503257 32503523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01540 5 33 Carbohydrate Esterase AT3G05610 68.966 1.51e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01540 K01051 - rvl:131326782 54.6842