Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01538 ATGAGCATGTACAGGTTCATCATCAAGATAAAGGCAGGGGTATGCATGGAGAACGTAGAGATACTGAGGAAGAAGGCGAATATCATGTTGGTCGGAGACGGGATATTTTCAACAGTGATCATTAGCTGCAAAAATTTCTTTGATGGGTTATTGACCTTCAATTCAGCTACCTTAAATCTCTGCATCGCGGATCTTCGTCCTCACCCCTGCAATCTCCATGGCGGAATACAATCGCCGCTCGCCGCTACAATCGCCGCTGAAATATAG 267 0.4569 MSMYRFIIKIKAGVCMENVEILRKKANIMLVGDGIFSTVIISCKNFFDGLLTFNSATLNLCIADLRPHPCNLHGGIQSPLAATIAAEI* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01538 88 Pfam Pectinesterase 3 59 IPR000070 GO:0030599|GO:0042545
Eupl13g01538 88 PANTHER PECTINESTERASE 5 59 - -
Eupl13g01538 88 Gene3D - 2 72 IPR012334 -
Eupl13g01538 88 SUPERFAMILY Pectin lyase-like 5 60 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01538 Eupl-Chr13 32496331 32497283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01538 2 58 Carbohydrate Esterase AT3G43270 56.140 7.37e-15 66.2