Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01534 ATGGGTTGTGTTCAGGCCAAACCGAATGTGTACTCGCCACCTCGAGGAGTCGAGAAGATGAAGTTGCAGAATGGGTATGTTGTCAAAGGGAGCGGTGGCAGTGGCGGGAAGCCAACAGGTCAAAAGCAGGTGGGTAAGGATTCCAGTAGGTCGTTTCGGCATGAGGTGACTAATAAGGATAACAACAACAACAATAATAATAATGTGGGAGTTGTGGGTGGTGGTGGCAGCGGCGGTGGAGAGGGGAAATTGATTGGAAGAGAAGGAGAGAGGGAGGGTGGTGGTGGGAATGTTTCGCAGAGGATTTCATCGAAGAGACAAATTGGAGTGGATGAGCTCGTGGACGGCTGGCCGAAGTGGCTTACTGATAATATTCCTAGAGAAGCTTTGGTTGGTTTGGTTCCGAAGAGCGCCGAGTCTTATGATAAACTTGATAAGATAGGCCAGGGAACCTACAGTAACGTTTACAAAGCTCGAGACCGGGACACTGGCAAGATTGTTGCCCTTAAGAAGGTTCGCTTCGACACTTCAGAGCCTGAGAGTGTGAGATTTATGGCACGAGAGATCGCGATACTACAGAAGCTGGATCATCCTAATGTTGTCAAGCTCGAAGGACTGGCCACATCAAGAATGCAATATAGTCTTTACCTGGTCTTCGATTGCATGCTGACGGACTTGGCAAGAATCATCTCCAGCCCTGATGGGAGGCTCACTGAACCACAGGTCAAGTGTTATATGCAGCAGCTGCTTTTGGGTCTGCAGCACTGTCATGAGAGAGGTATTTTACACCGAGACATCAAGGGATCCAATTTGTTGATCGATAAACATGGGATGCTGAAGATTGGGGATTTTGGGCTTGCGAATGAATTCAAACCTAATCAAAAGCGTCCTCTGACAAGCCGAGTTGTGACGCTTTGGTATAGAGCCCCTGAGCTTCTGTTAGGTGCAACAGATTATGGAGTTGGGATTGATCTTTGGAGTGCAGGATGCCTTTTGGCCGAGATGTTTGCTGGAAGGCCAATTATGCCTGGAAGGACAGAGGTTGAGCAACTTCATAGGATTTTCAAGTTGTGTGGATCACCATCAGAGGATTATTGGAAAAAACTGAAGCTGCCAACAAGCTTCCGACCACCACAACCATACAAACCTAGTCTTTTCGAAACCTTCAGGGATTTTCCTGCCTCTTCTTTGGGTATCTTGAACATGCTTCTTGCTCTAGACCCCAATTACCGTGGCTGTGCATCATCTGCTCTCAAAAACGAATTCTTTAGTACAAGCCCATTGGCATGCGACCTTTCAGGCCTACCTGTAATTTACAAGGAGGAGGATGAACCAACTCGCACCAATGAGAGGAGAAAGCGCAAGGACTCAAAAATGAAACAACGGTCTCGAACACGTCGTGAGGGTCAAAGAAAAAAGGCCGTAGCTCCTGAAAAATCTAGAGATTTTGGATCATTTAAAGAGGATCAGGAAAAGAGTGCGGAGCCAATTTTCCATAGCCAAGAGATGGGTAGCAGTACAGGTAGTACTTCCTCTAGTGTAAAGCCAAGCAGGCATGAAGAGAGCTCCCTTCCATCTCTGTCCCCACTTGTACCTTCTCATCGAAAGCGATCCCCGAGAACAGAGGGTCATCCTAATGCTACAAAGAACATTAAGAACATGCCTCCTTTGCCCACCTCCAAAAGAAGCAATACCAAGTACACTGAAGGAAATGATAACTTTTACAAAATGTCTAAGGATCGCAGGTCTGTCTCAACGAGGGATTTTCGGAAATTGGAAGAAGAAGAATTGTCTAAACATTATGCTTTGGATGATTAA 1818 0.4648 MGCVQAKPNVYSPPRGVEKMKLQNGYVVKGSGGSGGKPTGQKQVGKDSSRSFRHEVTNKDNNNNNNNNVGVVGGGGSGGGEGKLIGREGEREGGGGNVSQRISSKRQIGVDELVDGWPKWLTDNIPREALVGLVPKSAESYDKLDKIGQGTYSNVYKARDRDTGKIVALKKVRFDTSEPESVRFMAREIAILQKLDHPNVVKLEGLATSRMQYSLYLVFDCMLTDLARIISSPDGRLTEPQVKCYMQQLLLGLQHCHERGILHRDIKGSNLLIDKHGMLKIGDFGLANEFKPNQKRPLTSRVVTLWYRAPELLLGATDYGVGIDLWSAGCLLAEMFAGRPIMPGRTEVEQLHRIFKLCGSPSEDYWKKLKLPTSFRPPQPYKPSLFETFRDFPASSLGILNMLLALDPNYRGCASSALKNEFFSTSPLACDLSGLPVIYKEEDEPTRTNERRKRKDSKMKQRSRTRREGQRKKAVAPEKSRDFGSFKEDQEKSAEPIFHSQEMGSSTGSTSSSVKPSRHEESSLPSLSPLVPSHRKRSPRTEGHPNATKNIKNMPPLPTSKRSNTKYTEGNDNFYKMSKDRRSVSTRDFRKLEEEELSKHYALDD* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01534 605 FunFam Putative serine/threonine-protein kinase 224 461 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 573 588 - -
Eupl13g01534 605 SMART serkin_6 141 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01534 605 MobiDBLite consensus disorder prediction 1 103 - -
Eupl13g01534 605 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Eupl13g01534 605 SUPERFAMILY Protein kinase-like (PK-like) 135 428 IPR011009 -
Eupl13g01534 605 FunFam probable serine/threonine-protein kinase At1g54610 128 223 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 453 469 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 499 529 - -
Eupl13g01534 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Eupl13g01534 605 CDD STKc_CDK9_like 141 423 - -
Eupl13g01534 605 PANTHER CELL DIVISION PROTEIN KINASE 139 428 - -
Eupl13g01534 605 Gene3D Phosphorylase Kinase; domain 1 133 222 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 544 572 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 470 496 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 443 588 - -
Eupl13g01534 605 MobiDBLite consensus disorder prediction 58 72 - -
Eupl13g01534 605 Gene3D Transferase(Phosphotransferase) domain 1 224 474 - -
Eupl13g01534 605 Pfam Protein kinase domain 141 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01534 605 ProSiteProfiles Protein kinase domain profile. 141 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01534 Eupl-Chr13 32473786 32480059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01534 136 467 Core Cell Cycle Gene Families AT5G10270 43.840 3.86e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl13g01534 Pkinase 5.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01534 K08819 - msin:131228730 754.592