Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01530 ATGTTATGGTTTCTCCAACCGGACTATACAACAGATGTTTTGCTGATGGAGTGTACTATGATCTTGATGGATCAACAAACTGAAGGGCTACCACAATACAAACATATTGAGCAAAATGATTTCTTGTATCGAAAGCACAAGAAGCAGAAAGAGGAGGATATTGCTACATGTGATTGCAAATATGATGATAATGATCCTGATAGTGCGTGTGGGGAGAGGTGCTTGAATGTACTAACCAGCACAGAATGTACACCTGGCTATTGCCCTTGTAGTAGCTATTGCAAGAATCAGAGATTCCAGAAATGCGAATATGCCAAATCAAAGTTGTTCAAAACTGAAGCCCGTGGATGGGGTCTTCTGGCTGACGAGAATATTAAGGCTGGACAGTTTATTATTGAATATTGTGGAGAAGTAATTTCATGGAAAGAAGCAAGACGAAGGTCTCTAACTTATGAACATCAAGGTCTGAAAGATGCATTTATCATATCTCTCAATGCCTATGAATCAATTGATGCAACTAAAAAGGGAAGCCTTGCTCGGTTCATAAACCATTCATGCCAGCCGAATTGTGAAACGAGGAAGTGGACAGTGTTGGGGGAAATAAGAGTTGGGATATTTGCCAAACAAGATATTCCTGCTGGAACCGAACTGGCATATAATTATAACTTTGAATGGTATGGAGGTGCTAAGGTTCGCTGCCTCTGTGGTGCAGTCTGCTGTTCTGGATTTCTTGGGGCAAAATCTCGTGGTTTCCAGGAGGATACATATTTATGGGAAGATGACGATGATAGATACTCGGTTGAGAATATCCCTCTATATGATTCCGAGGAGGATGAGCCTACATCAAAGCTCCTCAAGACTACAGACTCCTCACAATTTGAGTCTACTACCAAGGAGAAACTTGACTATCCAGTGAGAATGGATGATGATTTAGAAACTGAGCACCGTTCGCAGTCCACTGCACTTGTTATAGAGCCACTTAATTCAGTTCCAATGGAGGGTGTGGTAATGGATAAGACAAAAACTGAAGTAAGCGAAGAGAATAAATTATATCCACAAGATACTCATCAGACTTTTGCAAATAAAAATGCAATGATATCTCGTATCCGAAGTAATAGTGCATGCCGGAACTATTACATACAAACAAGCCCTATGTCCAACAAAAGATCACCACAGTTTGCTAATGGAAGATTGAAAAATGTTGCCCAGAAGCAAGTCGACACAAAACTTCTTGGTCAACTCTTAGCATCAAAGGAAGCACGAGACGAGGTCTACAGTTACGAGGAAACAAAGAAACAGGCTACCTCCGAACTTGATTCCTTGTACAACGAAATAAGGCCTGCCATTGAAGAACATGAGAGGGACAGCCAAGACAGTGTGTCTACCAGCGTAGCAGAGAAGTGGATAGAAGCCAGCTGCTTTAAACTGAAAGCAGAATTCAACCTTTATTCGTCCATCATTAAGCATGTCGCGTGTGCTTCCCGAAAGGCACAGCATGAAGTAAATCCCACTGAAGGAGACAGAGAAAATGGAGTCAAATATTTGACAAATTAG 1554 0.4131 MLWFLQPDYTTDVLLMECTMILMDQQTEGLPQYKHIEQNDFLYRKHKKQKEEDIATCDCKYDDNDPDSACGERCLNVLTSTECTPGYCPCSSYCKNQRFQKCEYAKSKLFKTEARGWGLLADENIKAGQFIIEYCGEVISWKEARRRSLTYEHQGLKDAFIISLNAYESIDATKKGSLARFINHSCQPNCETRKWTVLGEIRVGIFAKQDIPAGTELAYNYNFEWYGGAKVRCLCGAVCCSGFLGAKSRGFQEDTYLWEDDDDRYSVENIPLYDSEEDEPTSKLLKTTDSSQFESTTKEKLDYPVRMDDDLETEHRSQSTALVIEPLNSVPMEGVVMDKTKTEVSEENKLYPQDTHQTFANKNAMISRIRSNSACRNYYIQTSPMSNKRSPQFANGRLKNVAQKQVDTKLLGQLLASKEARDEVYSYEETKKQATSELDSLYNEIRPAIEEHERDSQDSVSTSVAEKWIEASCFKLKAEFNLYSSIIKHVACASRKAQHEVNPTEGDRENGVKYLTN* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01530 517 FunFam Histone-lysine N-methyltransferase 19 257 - -
Eupl13g01530 517 ProSiteProfiles Post-SET domain profile. 229 245 IPR003616 -
Eupl13g01530 517 SUPERFAMILY SET domain 31 242 IPR046341 -
Eupl13g01530 517 Pfam SET domain 116 222 IPR001214 GO:0005515
Eupl13g01530 517 SMART shorttest3 52 104 IPR006560 GO:0005634|GO:0042054
Eupl13g01530 517 SMART set_7 105 228 IPR001214 GO:0005515
Eupl13g01530 517 MobiDBLite consensus disorder prediction 498 517 - -
Eupl13g01530 517 Gene3D SET domain 12 257 IPR046341 -
Eupl13g01530 517 Coils Coil 417 437 - -
Eupl13g01530 517 ProSiteProfiles AWS domain profile. 52 103 IPR006560 GO:0005634|GO:0042054
Eupl13g01530 517 PANTHER SET DOMAIN PROTEINS 25 502 - -
Eupl13g01530 517 SMART PostSET_3 229 245 IPR003616 -
Eupl13g01530 517 Pfam AWS domain 65 102 IPR006560 GO:0005634|GO:0042054
Eupl13g01530 517 ProSiteProfiles SET domain profile. 100 222 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01530 Eupl-Chr13 32364075 32393294 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01530 87 244 C2H2 Transcription Factor Family AT2G23740 34.091 1.66e-21 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl13g01530 SET 3.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01530 - - nnu:104592685 778.859