Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01496 ATGTTGGGGATGTCTGGTTTGATGGGTAGTAATTCCGGCGTCAGTGCTGGAAAACATAAAGATGATGATCAGGTGGGTGTTGTTGGGTTGATGACAGGAGGGTTTGGAGAAGAAGAGAGAGGGAGAAGTGAAGAGGATGACCGGAATTCTGGTGGAAATCGGTGGCCTCGTCAAGAAACTTTGGCTTTGTTGAAGATACGGTCTGATATGGACGTTGCTTTTCGAGACTCTACTCTTAAAGGCCGACTATGGGAAGATGTTTCTAGGAAATTAGCTGAGCTTGGTTTTCATCGAAGCGCCAAGAAATGCAAGGAGAAGTTCGAGAACATGTACAAGTACTACAAAAGAACCAAAGAAGGACGAGCTGCAAAGCAAGACGGCAAAATCTACAGGTTTTCCGATCAATTAGAAGCTCTCGACAACCACTCATTACTTCCATCGCTTTCCCAAGAAAAACTTCAAATTCCTCCCGTGTCGATAATGGCGATAAAAAATCCAACAAACATCTCTCAAACTACAGATTTCATCTCCACCTCCACCCCTTCTTCATCCTCCTCCGACGAAGAATCCGAAGGTACCCAGAAGAAAAAGAGAAAATTGAAGGCTTTCTTCGAGAATTTAATGAAAGAAGTAGTCCAAAAGCAAGAAACCTTACAGAAGGAATTCTTAGAAGCGATAGAGAAACGAGAACATGAACGTATGGTAAGGGAAGAAGCCTGGAAGATGCAAGAATTGGCTAGAATGAATCGAGAACATGAGATTCTAGTCCAAGAACGATCGATCGCCGCAGCGAAGGACGCAGCTGTGATTGCATTCTTACAGAAGATCTCTGAACAATCCAACCTGGTGCAATTACAGGAGAATTCATCATCAGGGATAGTGGAGAAAATTGTAGACAACCCCAGATCAGATAATTTTGAGAATTTTATTCCAAGAAGCTCTTCTCGATGGCCGAAAGCCGAAGTTCAAACCTTGATTAAGCTCCGAACTTGTCTCGATCTCAAGTATCAAGATAATGGGCCAAAAGGGCCATTATGGGAGGAGATCTCAGCTGCCATGAGAAAGCATGGTTACAATAGGAATGCAAAGAGGTGCAAAGAGAAATGGGAGAACATCAATAAGTACTTCAAGAAGGTAAAAGAGAGCAACAAGAAAAGGCCTGAAGATTCAAAGACATGCCCCTACTTTCACCAACTTGATGCTCTTTACAAGGAGAAGATGAAGAAGATCAATAACTCATACAGTACTCCTGGTTATGGTTTGAAGCCAGAAGAGCTTGTAATGCAGATTATGGCCCAGCCTGAACAACAACGGCTACCGCTCCCGCTCCCGCTCCGACAAGAACAATTACGGCCCGAGTCGGTAATGGAAGACCTTAATTGCGAGAATATTGATCAGAAACATGAAGAAAATGAAGAAGATGGAGAAGAAGAAGAAGATGAAGATGAAGATGAAGGATCTGGTTATGAGATTGTAACTCACAAGCCTTGTTCAATGGCCATTGTAGAGTCAAGCTAA 1518 0.4302 MLGMSGLMGSNSGVSAGKHKDDDQVGVVGLMTGGFGEEERGRSEEDDRNSGGNRWPRQETLALLKIRSDMDVAFRDSTLKGRLWEDVSRKLAELGFHRSAKKCKEKFENMYKYYKRTKEGRAAKQDGKIYRFSDQLEALDNHSLLPSLSQEKLQIPPVSIMAIKNPTNISQTTDFISTSTPSSSSSDEESEGTQKKKRKLKAFFENLMKEVVQKQETLQKEFLEAIEKREHERMVREEAWKMQELARMNREHEILVQERSIAAAKDAAVIAFLQKISEQSNLVQLQENSSSGIVEKIVDNPRSDNFENFIPRSSSRWPKAEVQTLIKLRTCLDLKYQDNGPKGPLWEEISAAMRKHGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKMKKINNSYSTPGYGLKPEELVMQIMAQPEQQRLPLPLPLRQEQLRPESVMEDLNCENIDQKHEENEEDGEEEEDEDEDEGSGYEIVTHKPCSMAIVESS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01496 505 MobiDBLite consensus disorder prediction 171 188 - -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 450 505 - -
Eupl13g01496 505 ProSiteProfiles Myb-like domain profile. 47 111 IPR001005 -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 37 53 - -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 171 195 - -
Eupl13g01496 505 SUPERFAMILY Homeodomain-like 313 375 IPR009057 -
Eupl13g01496 505 CDD GT1 53 118 - -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 1 56 - -
Eupl13g01496 505 FunFam Trihelix transcription factor GT-2 317 378 - -
Eupl13g01496 505 Coils Coil 461 481 - -
Eupl13g01496 505 Gene3D - 317 378 - -
Eupl13g01496 505 Gene3D - 55 116 - -
Eupl13g01496 505 ProSiteProfiles Myb-like domain profile. 315 373 IPR001005 -
Eupl13g01496 505 SMART sant 51 113 IPR001005 -
Eupl13g01496 505 SMART sant 313 375 IPR001005 -
Eupl13g01496 505 FunFam Trihelix transcription factor GT-2 55 116 - -
Eupl13g01496 505 CDD GT1 315 380 - -
Eupl13g01496 505 PANTHER FI21293P1 39 462 - -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 469 487 - -
Eupl13g01496 505 MobiDBLite consensus disorder prediction 451 468 - -
Eupl13g01496 505 Pfam Myb/SANT-like DNA-binding domain 315 402 IPR044822 -
Eupl13g01496 505 Pfam Myb/SANT-like DNA-binding domain 53 136 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01496 Eupl-Chr13 31605256 31607912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01496 44 437 Trihelix Transcription Factor Family AT1G76880 51.346 2.45e-143 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl13g01496 Myb_DNA-bind_4 2.3e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01496 - - nnu:104599891 596.66