Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01474 ATGGAACCCCAATACACCGACACACTCGCCGGAAAACCCTTCTCTGCCCGATTTTCCGGCCGAGCTGACATCGACAGGATGCCCGAAACCCCACCACGGGGATCCCACCACCGGCGGGCCCAGTCAGAGACCTTCTTCCGATTCCCAGATGACATCCTCTTCGACGCCGACGTTGATTTCAATCTTACCGGCATCGATATCCCTTCCATGTCTGAAGAAAACGAAGATTCTCGCGGCAACGGTGGGTTTCCGATGACTGTCGATTCTGGGAAGTTGGAGGAATCCAACGGTGAGAAGGTCAAGGGGAAACTGGCGGGAGCTAATCATTTTCGGAGCTTATCTGTTGGCGCCGATTTTTTTGAGGGGTTAGGGTTTCAACCATCTCCAGTTGGTGGTGGCGGGGATGGGGAGAAATTTGGCGAGAAAGGGGTTCAGGAGAGGAGGATGCATCGGCATAGTAATTCCATGGATGGGTCTTCATCGTCGTTCGAAGCGGAGTCCATGGATAGTGCGAAAAAGGCGATGGGACCAGATAGGCTGGCGGAATTGGCTTTGATTGACCCAAAGAGAGCTAAAAGGATTCTTGCAAATAGGCAATCTGCAGCAAGGTCAAAGGAGAGGAAGATTCGTTACACCAGCGAACTAGAAAGGAAGGTGCAGACACTTCAGACAGAGGCAACTACCCTCTCAGCACAAGTTACAATGCTACAGAGAGACACTTCTGGTTTGACTACTGAGAACAAGGAACTCAAACTGCGGTTGCAGGCCATGGAGCAACAAGCACATCTTCGAGATGCTCTGAACGAAGCGTTGAGGGAAGAAGTGCAGCGACTTAAGATAGCTACTGGAGAAGTCCAATCTGTCAAGGGGAACTCCTTCAACAGAGGACTTCCTCCATTTTTCTCGCAGTCACAACCTTTACATCATTTTAGCATTCCTCAGACCCAGCAGCAGCAACAGCAGGAGCAGCTCCATATGTCTCAGTCATCTGCCAACAGTCAATCGCTCGGGGGGCAGCCTCAACAAGGCACCATGGACTTCCATCAGAGGGTCTAA 1056 0.5142 MEPQYTDTLAGKPFSARFSGRADIDRMPETPPRGSHHRRAQSETFFRFPDDILFDADVDFNLTGIDIPSMSEENEDSRGNGGFPMTVDSGKLEESNGEKVKGKLAGANHFRSLSVGADFFEGLGFQPSPVGGGGDGEKFGEKGVQERRMHRHSNSMDGSSSSFEAESMDSAKKAMGPDRLAELALIDPKRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQVTMLQRDTSGLTTENKELKLRLQAMEQQAHLRDALNEALREEVQRLKIATGEVQSVKGNSFNRGLPPFFSQSQPLHHFSIPQTQQQQQQEQLHMSQSSANSQSLGGQPQQGTMDFHQRV* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01474 351 CDD bZIP_plant_RF2 190 239 IPR044759 GO:0003700|GO:0006355
Eupl13g01474 351 MobiDBLite consensus disorder prediction 312 351 - -
Eupl13g01474 351 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Eupl13g01474 351 MobiDBLite consensus disorder prediction 22 40 - -
Eupl13g01474 351 MobiDBLite consensus disorder prediction 67 98 - -
Eupl13g01474 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 250 IPR004827 GO:0003700|GO:0006355
Eupl13g01474 351 Pfam bZIP transcription factor 189 247 IPR004827 GO:0003700|GO:0006355
Eupl13g01474 351 Coils Coil 212 232 - -
Eupl13g01474 351 Gene3D - 188 242 - -
Eupl13g01474 351 Coils Coil 240 260 - -
Eupl13g01474 351 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 24 343 - -
Eupl13g01474 351 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Eupl13g01474 351 FunFam Transcription factor VIP1 188 241 - -
Eupl13g01474 351 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01474 Eupl-Chr13 31185092 31194026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01474 22 317 bZIP Transcription Factor Family AT1G43700 51.829 2.56e-83 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl13g01474 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01474 K20557 - nnu:104599870 496.123