Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01472 ATGGTTGGAAGTTTTGAAGTTGAAGTAGTTTCCGGTGAGTTGAACGGAAAGCTCGCGGTGTTACCTGAGGAGTTTGATCCAACGGTTGTGATTCCGGAGCCATTGCCACCGGTGGTGGAGAATGAAGATAGCGTCAATGGCGAAGCTGGAGAAGGTGAAGTGACGAAGAGCAGAGAGATTGTGCTGGGAAGGAATGTTCATACAATGTGCCTTGCCGTTACGGAGCCCGATATAGACGATGAGATCACCGGAGAAAGGGAAGGTTATATGGCCAGTGTGTTGGCCAGATACCGCAAGTCTCTAATGGAAAGGACCAAGCACCACTTAGGTTACCCTTATAATCTAGACTTCGATTATGGAGCTCTTGCACAGCTGCAACATTTCTCTATCAATAATCTTGGCGATCCCTTTATTGAGAGCAACTACGGCGTTCATTCCAGACAGTTCGAAGTGGGTGTGTTAGATTGGTTTGCCCGTCTCTGGGAATTAGAGAAGGATGAATATTGGGGGTATATTACAAATTGTGGTACAGAAGGCAATCTTCATGGTATCCTGGTCGGAAGGGAAGTGTTTCCAGATGGAATTCTATATGCATCACGGGAGTCACATTATTCTGTCTTTAAAGCTGCACGGATGTACAGAATGGAATGCATAAAGGTCGACACTCTAGTCTCTGGTGAAATCGATTGTGCAGATTTCAAAGAGAAACTATACCTTAACAAGGACAAACCAGCCATCATCAATGTGAACATAGGGACAACGGTTAAAGGAGCTGTTGATGATCTAGATCTGGTTATAAAAACTCTTGAAGAAACAGGATTCTCTCATGACCGATTCTACATCCACTGTGATGGGGCTTTATTTGGGCTCATGATGCCTTTTGTCAAACTTGCACCAAAAGTCACGTTTAAGAAGCCCATTGGAAGTGTGAGTGTTTCTGGTCACAAGTTTGTTGGATGCCCGATGCCTTGTGGTGTTCAGATAACAAGACTGGAGCACATCAACGCCCTCTCAAGAAACGTTGAGTACCTCGCTTCCCGGGATGCCACTATCATGGGCAGCCGCAATGGCCATGCTCCAATCTTCCTCTGGTACACTCTGAACCGGAAAGGTTACAGAGGGTTCCAGAAAGAAGTCCAGAAGTGCCTTAGGAATGCCCACTACTTGAAAGACCGTCTTCAAGCTGAAGGGATAGGTGCCATGCTTAATGAGCTCAGCAGCACAGTTGTGTTTGAGAGGCCGCAAGACGAAGAGTTTGTTCGCCGATGGCAACTTGCCTGCCAGGGCAACATTGCTCATGTTGTGGTGATGCCCAATGTCACCATTGAGAAGCTCAACGATTTCTTGAATGAATTAATTCAGAAACGTTTAACTTGGTTCCAGGATGGAAAGGTTCAAACTCCTTGTATTGCAGTGGATGTCGGGAAGGAAAATTGTGCTTGTGCTCTGCATAAGTGA 1458 0.4595 MVGSFEVEVVSGELNGKLAVLPEEFDPTVVIPEPLPPVVENEDSVNGEAGEGEVTKSREIVLGRNVHTMCLAVTEPDIDDEITGEREGYMASVLARYRKSLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECIKVDTLVSGEIDCADFKEKLYLNKDKPAIINVNIGTTVKGAVDDLDLVIKTLEETGFSHDRFYIHCDGALFGLMMPFVKLAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINALSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLQAEGIGAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIEKLNDFLNELIQKRLTWFQDGKVQTPCIAVDVGKENCACALHK* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01472 485 Gene3D - 124 367 IPR015421 GO:0003824
Eupl13g01472 485 FunFam Serine decarboxylase 1 124 367 - -
Eupl13g01472 485 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 309 330 IPR021115 GO:0016831
Eupl13g01472 485 SUPERFAMILY PLP-dependent transferases 105 453 IPR015424 -
Eupl13g01472 485 Gene3D Aspartate Aminotransferase, domain 1 368 456 IPR015422 GO:0003824
Eupl13g01472 485 PANTHER - 44 485 - -
Eupl13g01472 485 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 408 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01472 Eupl-Chr13 31171282 31182744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01472 251 394 Calmodulin-binding Proteins AT1G65960 28.105 6.20e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01472 K25193 - nnu:104586258 884.789