Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01469 ATGGAAACCAGTCAATACCCATCATATCCTTTCAATATTCAATCTTCTTGGATAATGGACTTCGAGGAGACCCAGCTCCTCGAGCCAAGCTACGACCAAGAACTCCATGAATCCAGTTTGTTAGCTCCATTTACCTTCCAACTAGAAGAACCCACCGTCCCAAACACCATACAAGATGGTGTTTTTGATGATTACTACATGGAAAGATTACTAGAAATGGAGACAGATCTCAGTGCAGACCCGAATTCCATTGTTTCCGAAGCTGATTCTCTCATGGACTTCGATATGGGTTTTGACAATGTCACTAGTACTGAAGAAAATTCTCATTTGAAGGGAATTCAGGAGGAGTTGATGGAGGAAAGCAGCTTAACTGATCTCCTATTGACAGGAGCAGAAGCTGTTGAAGCTGAGAACTGGCCTCTCGTTTCGACTGTGATCACTAGGCTCAACAGTCTTCTTTTTCATGGAAAAACTGAGGACGACCCATTTACTAGATTGGCCTTCTTCTTCACTCAAGGCCTACAGTACAAGAGCATCAATGCTCCCGAAGTACTATATGAGCCTGTTCTTCCTAGACAGAAAAACACCATGTCTGCTTTTCAGATGCTTCAAGAGCTCTCCCCCTATGTGAAATTTGCACACTTCACTGCCAACCAAGCAATCCTCGAGGCGACCCATGGCGAACAGGAGGTTCATGTGATCGATTTCGATGTCATGGAAGGAATCCAATGGCCACCATTGATGGTTGATCTAGCACTGAGGAAGGAAGCTTTCTTGAGAATAACTGCAGTCGTCGGAGACCCGCAAAACGTCGATCTTGTCCAACAAACAGGAAGAAGACTCAAGGAGTTTGCTGATTCAATAAATTTGCCTTTCAGCTTTGATCAGTTGGTGATGAAAGAAGAAGAGGATTTTAAAGAAATTGAAGTGGGTCATACTCTAATAGCCAACTGTATGATTCACCAACTTCACATGCCCAACAGGAACTTCTCATTAGTTAAATCCTTCTTGGGTGGTGTTAGCAAGCTATCACCCAAGATGGTTGTTTTAGTAGAAGAAGAGCTGTTTAATTTTTCTAAAATCCCATCTATGTCCTTTGTAGAGTTCTTCTGTGAGGCTCTCCACCATTACACTGCACTGTCTGATTCACTAATGAGTAGCTTTCGTGCTGGGTACAAGGTAGGGTTGAAGCTGATTGAGAAGGAGTTCTTGGGGCTTAGGATCTTGGACTCTGTGAGGCAATTCCCTTGTGAGATGAATGAGAAGAAGTTATGGGGAGATGGGTTTTCATCATTGAAGAGATTTAAGGCCATTCCTATGAGTTCTTGTAATGTTTCCCAAGCTAAGTTTTTGGTGGGTCTCTTTAGTGGGGGATATTGGGTGCAGCATGAGAAGTGCAGGCTGACTTTGTGTTGGAAATCAAGACCTTTGACAACAGCTTCTATTTGGGTCCCTACATCGCACTTTTAG 1470 0.4327 METSQYPSYPFNIQSSWIMDFEETQLLEPSYDQELHESSLLAPFTFQLEEPTVPNTIQDGVFDDYYMERLLEMETDLSADPNSIVSEADSLMDFDMGFDNVTSTEENSHLKGIQEELMEESSLTDLLLTGAEAVEAENWPLVSTVITRLNSLLFHGKTEDDPFTRLAFFFTQGLQYKSINAPEVLYEPVLPRQKNTMSAFQMLQELSPYVKFAHFTANQAILEATHGEQEVHVIDFDVMEGIQWPPLMVDLALRKEAFLRITAVVGDPQNVDLVQQTGRRLKEFADSINLPFSFDQLVMKEEEDFKEIEVGHTLIANCMIHQLHMPNRNFSLVKSFLGGVSKLSPKMVVLVEEELFNFSKIPSMSFVEFFCEALHHYTALSDSLMSSFRAGYKVGLKLIEKEFLGLRILDSVRQFPCEMNEKKLWGDGFSSLKRFKAIPMSSCNVSQAKFLVGLFSGGYWVQHEKCRLTLCWKSRPLTTASIWVPTSHF* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01469 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 115 479 IPR005202 -
Eupl13g01469 489 Pfam GRAS domain family 124 483 IPR005202 -
Eupl13g01469 489 ProSiteProfiles GRAS family profile. 114 484 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01469 Eupl-Chr13 31099230 31100699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01469 123 483 GRAS Transcription Factor Family AT5G41920 32.718 2.19e-43 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl13g01469 GRAS 1.7e-76 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01469 - - vvi:100248787 623.239