Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01452 ATGGAGTTGATCGAAGGAGTTGGAGAGAGTTCGTCGCCGCCGCGGAGTTCATTCAGCGGCTCCGATATAAAGAAAGATATTTATAATCGGCTGGTAGAGAGCGGGAATGAAGAGGTGGTATTTAATCCGGAGTTTCGCGAACAGTTGGATGCTCACTTCAATCGGTTGCCTGCTAGTTATGGACTAGATGTGAATATGGATAGAGTAGAAGATGTTTTATTACATCAAAAGCTTCTTGTCCAAGCTAAAGACCCCAACAAGCTACCTGTTTTCCATGTACGCTTCATGGAGAACATTCGGACTCGAGCAGATGGAAATGATGATCTACAGAAATCTATAGTTGTTTCTACTTCAAGGGCATGCTGTAATGCTGAACATGGAGTTGTGCCCTCAAATAACAGAAATAGGGATTGTGAGATTGACTTTGAACCTTGCTCAAAGCTTGAGGACTTAAATTTGGATGTTAGAAGGAATGCTGAAGACATTGAGGGAAGATGTCTCACAGAGAAATTTTCTGGAAGGCAGGAATTTTCACATGTTCCAATACATGAAATTATTTTTTCTACAGTCGACAAGCCCAAGCTTCTTAGTCAGCTCTCTGCTTTGCTTTCTGACATAGGGCTAAACATCCGTGAGGCACATGTGTTCTCGACAACTGATGGCTACTCTTTGGATGTGTTTGTGGTGGATGGATGGCCTATTGAGGACACAGATGGTTTGCGTGAAGCGGTGGAGAAAGCAGTAGGAAGTAGCGAGGGGTCCTGGTCTGGTTCCTCCCCTTCTCATTCAGCCATAGGGAAGGCATTAGCAACTCAAGCAAAACCGGGTGATTGGGAGATTGATAGAAGATTGTTGAAGAGAGGAGAAAAAATTGCATCTGGATCTTGTGGAGATCTGTACCGTGGAATTTACCTAGGTCAGGAAGTAGCTGTAAAAATTCTTAGGTCTGAGCATTTAAATGAAGCTTTGGTGGTAGAATTCGCTCAAGAAGTAGCAATCCTAAGGGAGGTTCAACATAAGAATGTTGTTCGATTCATTGGCGCATGCACAAAGCTTCCACAGTTATGCATAGTAACAGAATATATGCCTGGAGGGAATCTCTATGATTATTTGCACAAGCCTCGAAAGGTCTTGGAACTGTCTTTGTTGCTGAAGTTTGCAATTGATGTCTGCAAAGGAATGGAGTATTTGCACCAAAACAATATTATTCATAGGGATCTGAAGACTGCCAATCTGTTGATGGATTCTGACCATGTTGTAAAGGTGGCAGATTTTGGTGTGGCTCGCTTCCAAAATCAAGGGGGAGTAATGACAGCAGAGACTGGAACCTACAGATGGATGGCACCTGAGGTTATAAATCATCAACCATATGATCAAAAAGCAGATGTGTTCAGTTTTGCTATAGTTCTGTGGGAGCTTGCAACATCCAAGGTACTTCCTGAAGTTGCATCAAACTTCAACATACACTTTATTGATCATTTAATTTCAGAACAAATGTTCCTTGTGAAGATAATCTTTTTTTCAGCTATGACGTTGGCATTGCAGGTCCCATATGATACAATGACCCCTTTACAAGCTGCCCTAGGAGTGAGACAGGGTCTACGACCGGTTCTTCCTGAGAATACACACCCCAGACTGTTGGACTTGATGCAGAGATGTTGGGAAGCAGTTCCTTGTGATCGGCCTTCCTTCTCAGAGATAACAGTTGAACTTGAAGAACTCCTTCAAGAGGTTCAGGCAACTTCAGATGTGTCAAATAGTTACCGATGA 1770 0.4282 MELIEGVGESSSPPRSSFSGSDIKKDIYNRLVESGNEEVVFNPEFREQLDAHFNRLPASYGLDVNMDRVEDVLLHQKLLVQAKDPNKLPVFHVRFMENIRTRADGNDDLQKSIVVSTSRACCNAEHGVVPSNNRNRDCEIDFEPCSKLEDLNLDVRRNAEDIEGRCLTEKFSGRQEFSHVPIHEIIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPIEDTDGLREAVEKAVGSSEGSWSGSSPSHSAIGKALATQAKPGDWEIDRRLLKRGEKIASGSCGDLYRGIYLGQEVAVKILRSEHLNEALVVEFAQEVAILREVQHKNVVRFIGACTKLPQLCIVTEYMPGGNLYDYLHKPRKVLELSLLLKFAIDVCKGMEYLHQNNIIHRDLKTANLLMDSDHVVKVADFGVARFQNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFAIVLWELATSKVLPEVASNFNIHFIDHLISEQMFLVKIIFFSAMTLALQVPYDTMTPLQAALGVRQGLRPVLPENTHPRLLDLMQRCWEAVPCDRPSFSEITVELEELLQEVQATSDVSNSYR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01452 589 ProSiteProfiles ACT domain profile. 184 258 IPR002912 -
Eupl13g01452 589 SUPERFAMILY ACT-like 183 249 IPR045865 -
Eupl13g01452 589 FunFam Serine/threonine-protein kinase isoform 1 275 363 - -
Eupl13g01452 589 Pfam Protein tyrosine and serine/threonine kinase 285 570 IPR001245 GO:0004672|GO:0006468
Eupl13g01452 589 MobiDBLite consensus disorder prediction 1 21 - -
Eupl13g01452 589 Gene3D Transferase(Phosphotransferase) domain 1 363 588 - -
Eupl13g01452 589 Gene3D Phosphorylase Kinase; domain 1 274 362 - -
Eupl13g01452 589 CDD STKc_MAP3K-like 291 571 - -
Eupl13g01452 589 SUPERFAMILY Protein kinase-like (PK-like) 270 575 IPR011009 -
Eupl13g01452 589 PRINTS Tyrosine kinase catalytic domain signature 442 452 IPR001245 GO:0004672|GO:0006468
Eupl13g01452 589 PRINTS Tyrosine kinase catalytic domain signature 461 483 IPR001245 GO:0004672|GO:0006468
Eupl13g01452 589 PRINTS Tyrosine kinase catalytic domain signature 396 414 IPR001245 GO:0004672|GO:0006468
Eupl13g01452 589 PRINTS Tyrosine kinase catalytic domain signature 359 372 IPR001245 GO:0004672|GO:0006468
Eupl13g01452 589 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 211 577 - -
Eupl13g01452 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 402 414 IPR008271 GO:0004672|GO:0006468
Eupl13g01452 589 ProSiteProfiles Protein kinase domain profile. 285 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01452 589 SMART serkin_6 285 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01452 Eupl-Chr13 30707079 30774901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01452 10 578 MAP Kinase Kinase Kinase AT2G17700 47.270 1.37e-167 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl13g01452 PK_Tyr_Ser-Thr 4.7e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01452 - - msin:131234800 839.721