Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01446 ATGGAGGATGAAATTACAGACATGCTGTCTGAAATCGTGACTGTTGGAGAGTATGTTTTGAGAGGGAGAGTAGGAGAAGGGCCTCTTTCGACCGTCTGGAAGGCCGAGCACAGATCCAATGGCGAAGAGGTGGCGCTGAAGCAGGTCTACCTCTCCAAACTCAACAGGAACCTCAAGGACTGCTTGGACTGCGAGCTCAGCTTCTTGTCCAGTGTCAAACACCCGAACATTATTCGCCTTGTCGACGTAATCCAGGCAGAAGGGTGCATATTCCTGGTCTTGGAGTTCTGTGCTGGGGGAAATTTAGCTTCTTACATTCAGCGCCATGGGAGCGTTCAAGAACAGATTGCCAGAAGATTTACACAACAGATTGGAGCTGGTTTAGAAGTACTACACACCCACCACATTATCCACCGAGACTTGAAACCAGAGAATATTTTACTATCTACCCCTAACAGTGATGCTGTGTTAAAGATTGCTGATTTCGGCCTCTCAAGAATTGTACATCCAGGCAACTATGCCGAGACTGTTTGTGGGTCTCCATTGTACATGGCTCCAGAAGTTCTGCAATTTCAAAGATATGATGAAAAGGTCGACATGTGGAGTGTCGGTGCTATTCTTTTTGAGCTACTGAATGGATATCCACCTTTTCGTGGTAGGAACAATGTTCAGCTTCTAGAGAAGATCAAGAAGTGTGAATTTCTGCCATTTTCTCAGATCATCCTCCCTGGGTTGCACCCGGACTGTGTCGATATGTGTACAAGACTACTCTGCACAAATCCAGTCAATCGTTTGTCCTTTGATGAGTTCTATAAGCATAAATTCTTGAGAAGATAA 837 0.454 MEDEITDMLSEIVTVGEYVLRGRVGEGPLSTVWKAEHRSNGEEVALKQVYLSKLNRNLKDCLDCELSFLSSVKHPNIIRLVDVIQAEGCIFLVLEFCAGGNLASYIQRHGSVQEQIARRFTQQIGAGLEVLHTHHIIHRDLKPENILLSTPNSDAVLKIADFGLSRIVHPGNYAETVCGSPLYMAPEVLQFQRYDEKVDMWSVGAILFELLNGYPPFRGRNNVQLLEKIKKCEFLPFSQIILPGLHPDCVDMCTRLLCTNPVNRLSFDEFYKHKFLRR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01446 278 CDD STKc_ATG1_ULK_like 24 275 - -
Eupl13g01446 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Eupl13g01446 278 Pfam Protein kinase domain 20 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01446 278 FunFam Serine/threonine-protein kinase ATG1t 11 278 - -
Eupl13g01446 278 ProSiteProfiles Protein kinase domain profile. 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01446 278 SUPERFAMILY Protein kinase-like (PK-like) 10 277 IPR011009 -
Eupl13g01446 278 SMART serkin_6 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01446 278 Gene3D Transferase(Phosphotransferase) domain 1 11 278 - -
Eupl13g01446 278 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 14 277 IPR045269 GO:0004674|GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01446 Eupl-Chr13 30611868 30616496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01446 16 278 CBL-interacting serine-threonine protein kinases AT2G30360 36.431 2.47e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Eupl13g01446 Pkinase 7.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01446 - - ming:122073069 448.358