Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01433 ATGGATTCGGTTGGAACGGAATCCGAAGAGAGTTCCAGTTATTCGGAGTCATCTGACCCTGACATTCAGGAAATCGATCCAACTTGTCGATATATCCGCTATAAAGAGGTACTTGGGAAAGGTGCTTTCAAGACGGTTTACAAGGCATTTGATGAAGTTGACGGAATTGAAGTAGCTTGGAATCAAGTTCAGATTGAAAACGTTTTACAGTCTCCAGAAGGTTTAGAAAGGCTGTACTCCGAAGTGCATCTCTTGAAATCTTTGAAGCATAGCAACATAATAAAGTTCTACAACTCGTGGATTGATGATCAGAAAAAGACTGTTAACATCGTCACCGAGTTGTTCACTTCGGGTAGCTTGAGACAGTATCGTAAGAAACACAAGAAGGTTGACATGAAGGCCGTGAAGGGGTGGGCGAGGCAGATTTTGATAGGTTTGAACTTTCTTCACAGTCATAACCCACCAATTATACATAGGGACCTGAAGTGCGATAACATCTTCATTAACGGTAACCACGGGGAAGTTAAGATCGGGGATCTTGGGTTGGCGACTGTCATGCAACAGGCTAATGCACGAAGTGTTATTGGCACTCCCGAGTTTATGGCACCTGAACTCTATGATGAGGAATATAATGAGTTGGTTGATATATACTCTTTTGGGATGTGCATGCTAGAGATGGTGACTTTCGAATACCCTTACAGCGAATGTAGAAACTCAGCTCAGATATATAGGAAGGTTTCATCTGGAGTAATGCCTGCTTCCCTTTCCAAGGTGAAAGATGCAGAAGTGAAACAGTTTATAGAGAAGTGTCTGGTCCCAGCAGCTCAAAGATTGCCAGCAAAGGAGCTTTTGAAGGACCCTTTTCTCCAAGTGGATGGATTTGCAGGGAATCGTCCCTTGCAGCTTCCTGATATTGTGACACCCAAAACAGGAGCCTTTGGAGACCGCTGTATGCTCTCAGAAGAGCCTACTAGTATACGGCAGATGCCCTTTTCCATGGATGTCGATATTGATGATGATAGTGAGCCTCCCATCATCACTTCTATTGAAAATTCAATTGCTGATGGAACCCATAATCTCTGCCTGGAGGTTCAAAGGGCGAAGAGAGGCAATGACTTCAGGTTAAAAGGGGAAAGAAATGATGAGAACTCTATATCGCTGATACTACGGATTGCAGATCAAAACGGTCGTGTAAGGAATATACATTTCCTGTTTTACCTCGACAGCGATACAGCCCTTTTGGTTGCCAGCGAAATGGTCGAGCAACTGGAATTAGCTGATCAGAATGTTTTGTTCATAGCTGAGTTGATTGATTTGTTGTTAATGAACTTGATACCAAGTTGGAAACCTTGTGTTCCCATTAATAAGCTGGTAGCTCCGAGTGGAATCCAAACCCCTAAGGGCTATAGTGAGGAGTCTCAATTGCCAGAACACGGAGACAGCTCGGTTGGATCTTTTCATAATGTTTTTGATGCTGTCAATCTTTCAAGCCCTTTAGCTTGTCTCGATTCTAGTTCTGTTGAAGGATCCCTTCAGCCAATGCATGAAGCTACCGATTATGTGAAGCTTGATGAGATCATGTCTCATGCTGATTTTGGGTCTCGAAATATAGCTATTGCAGAAGATCGAGGTTCGGAGATGTCATTTATTTCTGCAGTCTCTACGGAAGGAAACGATAGGAAGTGCTCCATCACCACGTGTACATGTGCTCACTCAGGATATATTGAATATAACGGGTATGGGATGAAAAGAGAAGTTAGAGAAACTGTATCTGGAGTTCAAATGGGCACATGCCCTAATGACAAAGAGATGGGAATCAACATGGGCAGCAGTGATATGCCAACCTCTTCGAGTTACCCAAGCAATGCTTCTTCTCTGATTTTGGAAGATGAGTATGACAATGAAGAGTTAAGATTAGAGTTGGAGCTGATCGAATTGCAGTACCAGCAAGCAATTAAGGACATATCCAAGAAAAGACATGAAGCTATCATGGTGGCAAAGAAAAGGTTGTCACAGAAGAAGATAGTGTCAGTTCACTAG 2040 0.4294 MDSVGTESEESSSYSESSDPDIQEIDPTCRYIRYKEVLGKGAFKTVYKAFDEVDGIEVAWNQVQIENVLQSPEGLERLYSEVHLLKSLKHSNIIKFYNSWIDDQKKTVNIVTELFTSGSLRQYRKKHKKVDMKAVKGWARQILIGLNFLHSHNPPIIHRDLKCDNIFINGNHGEVKIGDLGLATVMQQANARSVIGTPEFMAPELYDEEYNELVDIYSFGMCMLEMVTFEYPYSECRNSAQIYRKVSSGVMPASLSKVKDAEVKQFIEKCLVPAAQRLPAKELLKDPFLQVDGFAGNRPLQLPDIVTPKTGAFGDRCMLSEEPTSIRQMPFSMDVDIDDDSEPPIITSIENSIADGTHNLCLEVQRAKRGNDFRLKGERNDENSISLILRIADQNGRVRNIHFLFYLDSDTALLVASEMVEQLELADQNVLFIAELIDLLLMNLIPSWKPCVPINKLVAPSGIQTPKGYSEESQLPEHGDSSVGSFHNVFDAVNLSSPLACLDSSSVEGSLQPMHEATDYVKLDEIMSHADFGSRNIAIAEDRGSEMSFISAVSTEGNDRKCSITTCTCAHSGYIEYNGYGMKREVRETVSGVQMGTCPNDKEMGINMGSSDMPTSSSYPSNASSLILEDEYDNEELRLELELIELQYQQAIKDISKKRHEAIMVAKKRLSQKKIVSVH* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01433 679 CDD STKc_WNK 30 289 - -
Eupl13g01433 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Eupl13g01433 679 FunFam probable serine/threonine-protein kinase WNK9 115 294 - -
Eupl13g01433 679 SMART serkin_6 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01433 679 FunFam Probable serine/threonine-protein kinase WNK1 16 113 - -
Eupl13g01433 679 SUPERFAMILY Protein kinase-like (PK-like) 34 335 IPR011009 -
Eupl13g01433 679 Pfam Protein kinase domain 34 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01433 679 Gene3D - 383 465 - -
Eupl13g01433 679 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 661 - -
Eupl13g01433 679 ProSiteProfiles Protein kinase domain profile. 32 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl13g01433 679 Gene3D Transferase(Phosphotransferase) domain 1 115 294 - -
Eupl13g01433 679 MobiDBLite consensus disorder prediction 1 22 - -
Eupl13g01433 679 Coils Coil 634 654 - -
Eupl13g01433 679 Gene3D Phosphorylase Kinase; domain 1 16 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01433 Eupl-Chr13 30131144 30134689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01433 15 445 MAP Kinase Kinase Kinase AT5G41990 60.557 2.85e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Eupl13g01433 Pkinase 4.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01433 K08867 - nnu:104588847 956.822