Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01395 ATGTTTCAATCTCATGATAGTATGCTTCCATACCCTCCAAGGCCGTTGATGATGGATCGCAGATGGAAGGCTAACGTCGAATTAGCACCGAATTGCCCTCGATGCGCATCTCCGAACACCAAATTCTGCTACTACAACAATTACAGTTTATCACAGCCTCGATACTTCTGTAAAGGCTGTAGAAGGTACTGGACTAAAGGCGGGTCCTTACGAAACGTACCCGTTGGAGGAGGTTGTCGGAAAAACCGCCGAGGAAGATCGGTGAGACCCGATCGGGTCTCCACGACTTACAGTCCGACTTCGTATCTCCCAGATGACCCAAACCCGACTATCCCACTGACTCGAACCGACGGTTCAGATATCGATCTCGCCGTTGTTTTCTCTAACTTCTTGAATAATCAAGACTCATGTTCGGATCCTGGGCTTGTTGTACCCGAATTGCCAAATGATCAGGTAGATCGTCCATCCTTCGATATGTCGAATTCTACGAACCCGAATTATGATTCGCCGCCTATTCACTTTCCCCAAGAACATAACACGATCGAATGCCAGAGACCGTACGTTGCTCAGATGATTGGAGGACCTACACAGGTGTTTGTAGACGAGTTTGACTCGACCAACAAATATTACGAACCGCGAATCTCGCGATCCTTACTAAGTGATGTAGTTGTTCAAGATGATCTATGGTCGGACGCTGCAGCCGTGCCGAATATTTCATGGCAACCACCGCAGCTGCAAGGGTTCGAACCTGTACCGGATGATCAATCAACATTCTATCCGAATCAACTACACGGCAATTGGAGCTCCTTCGATATATCTAACTATGGAGTTTGA 834 0.4748 MFQSHDSMLPYPPRPLMMDRRWKANVELAPNCPRCASPNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGRSVRPDRVSTTYSPTSYLPDDPNPTIPLTRTDGSDIDLAVVFSNFLNNQDSCSDPGLVVPELPNDQVDRPSFDMSNSTNPNYDSPPIHFPQEHNTIECQRPYVAQMIGGPTQVFVDEFDSTNKYYEPRISRSLLSDVVVQDDLWSDAAAVPNISWQPPQLQGFEPVPDDQSTFYPNQLHGNWSSFDISNYGV* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01395 277 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 160 IPR045174 GO:0003700|GO:0006355
Eupl13g01395 277 MobiDBLite consensus disorder prediction 78 110 - -
Eupl13g01395 277 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Eupl13g01395 277 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Eupl13g01395 277 Pfam Dof domain, zinc finger 31 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01395 Eupl-Chr13 29210894 29212013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01395 24 276 C2C2-Dof Transcription Factor Family AT3G52440 40.299 3.35e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl13g01395 zf-Dof 2.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01395 - - nnu:104587962 257.299