Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01383 ATGCCCAGAAAACCCATAAAATTCCCCACCTCCTCCTCCCACTCTTCATTTCATTCTCATCCCTCCAAACGCAAATTCCTCCTCATCTCCATGGCTTCTCTTCTCTGTCTCACCCTCCTTTCTCTCCTCCTTTTCTTCTCTCTCTCCTCCGCAACCCACCGTCATCCAAAACCACCAGCAAAAGAACCACTTGGGGATTCAATCCCACTTGAGATCCAAAAAGCCTGCAAAGCAACCCAGAACCCAGAAACCTGCGAAACCTCTTTACTTCAATCTCACAATCTTCCCCAGAACCCTAAACCAATTGAAATCATTCAAGCTGCAATGTGGGTCTCAACCCAGAACCTCAAAACCGCTCAATCAATGGTGAAAACCATCCTCGACTCCTCTTCCGGCAACCCAAACCGCTCTACGGCTGCCAAAAACTGCCTTGAGGTCTTGCATAACTCGGAATACCGCTTAGCTTCGGCGGGTGACGTTCTGCCACGTGACAGGATCAAGGACGCTCGGGCATGGATTAGCGCGGCCCTTCTCTACCAGTACGACTGCTGGTCCGCCCTTAAATACGTTAACGATACTCAACGAGTTAACGAGACGATGGCATTTATGGCCTCGTTGATTGGGTTTACCAGTAATGCTCTTAGCATGGTGGTTTCATACGACCTGTTTGCAAACGAAACCACTTTGTGGAAACCGCCTGTGACGGAGAGGTCTGGGTTTTGGGAGCAAGGTGGGAGTGGAATTGGCGGGGGAGATTTGGGGTTCAAAGGCGGTTTTCCGTCTGGGTTAACGGCGGATGTGACGGTGTGTAAGGAGGGGGGAGCTGCGTGTTACAAGACGGTGCAGGAGGCGGTGGACGCGGCGCCGGATAACGAGAGTGTTCGCAAGTTTGTGATCAGGATTAGAGAAGGGGTTTACGAGGAGATCGTTAGGGTTCCGTTGGAGAAGAAAAATGTCGTGTTTTGGGGAGATGGCATGGGCAAAACCGTCATTACTGGGTCCTTAAATGTGGGCCAGCCGGGCATTTCCACTTACAACACTGCAACCGTCGGAGTTCTTGGGGATGGTTTCATGGCCCGTGATCTGACGTTCGAGAATACAGCGGGCCCAGACGCCCACCAAGCCGTCGCATTCCGATCAGACGGAGATCTCTCCATCTTTGAAAACTGTGAATTCCTAGGCAACCAGGACACGCTCTACGCGCACTCCTTACGCCAATTCTACAAATCATGCCGCATTGAAGGCAATGTTGACTTCATTTTCGGAAACTCAGCTGCAATCTTCCAAGACTCAATCATCCTGATCCGTCCCCGCCAACTCAAACCCGAAAAGGGCGAGAACAATGCAGTAACAGCACATGGCCGAACAGATCCCGGACAATCAACGGGCTTTGTTTTCCAAAATTGTGTGATCAACGGTACCGATGAATACATGAACTTGTACTATAGCAAACCCAAGGTTCACAAAAACTACCTGGGTAGACCATGGAAGGAATACTCAAGAACTGTTTTCATACATTGTTACCTAGAGACCCTTGTTACTGAACAAGGGTGGATGCCGTGGAGTGGGAGTTTCGCGCTATCGACGTTGTATTACGGAGAGTTCGAAAATTCCGGCGCGGGTGCGGCTAACATCTCCGCTAGAGTGCCGTGGAGTAGTCAGATTCCGGTGGACCATGTGTATGCTTATTCGGTGCAGAATTTCATTCAAGGCAATGAGTGGATTCCAGCGTCTTCTTAA 1740 0.5029 MPRKPIKFPTSSSHSSFHSHPSKRKFLLISMASLLCLTLLSLLLFFSLSSATHRHPKPPAKEPLGDSIPLEIQKACKATQNPETCETSLLQSHNLPQNPKPIEIIQAAMWVSTQNLKTAQSMVKTILDSSSGNPNRSTAAKNCLEVLHNSEYRLASAGDVLPRDRIKDARAWISAALLYQYDCWSALKYVNDTQRVNETMAFMASLIGFTSNALSMVVSYDLFANETTLWKPPVTERSGFWEQGGSGIGGGDLGFKGGFPSGLTADVTVCKEGGAACYKTVQEAVDAAPDNESVRKFVIRIREGVYEEIVRVPLEKKNVVFWGDGMGKTVITGSLNVGQPGISTYNTATVGVLGDGFMARDLTFENTAGPDAHQAVAFRSDGDLSIFENCEFLGNQDTLYAHSLRQFYKSCRIEGNVDFIFGNSAAIFQDSIILIRPRQLKPEKGENNAVTAHGRTDPGQSTGFVFQNCVINGTDEYMNLYYSKPKVHKNYLGRPWKEYSRTVFIHCYLETLVTEQGWMPWSGSFALSTLYYGEFENSGAGAANISARVPWSSQIPVDHVYAYSVQNFIQGNEWIPASS* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01383 579 Pfam Pectinesterase 266 572 IPR000070 GO:0030599|GO:0042545
Eupl13g01383 579 MobiDBLite consensus disorder prediction 1 20 - -
Eupl13g01383 579 SUPERFAMILY Pectin lyase-like 263 577 IPR011050 -
Eupl13g01383 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 70 219 IPR035513 -
Eupl13g01383 579 PANTHER PECTINESTERASE 42 576 - -
Eupl13g01383 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 217 IPR035513 -
Eupl13g01383 579 Pfam Plant invertase/pectin methylesterase inhibitor 72 216 IPR006501 GO:0004857
Eupl13g01383 579 Gene3D - 263 579 IPR012334 -
Eupl13g01383 579 FunFam Pectinesterase 260 579 - -
Eupl13g01383 579 CDD PMEI-like_3 75 217 - -
Eupl13g01383 579 SMART PMEI_2 67 216 IPR006501 GO:0004857
Eupl13g01383 579 FunFam Probable pectinesterase/pectinesterase inhibitor 51 70 219 - -
Eupl13g01383 579 NCBIfam pectinesterase inhibitor domain 39 216 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01383 Eupl-Chr13 28888821 28892755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01383 15 579 Carbohydrate Esterase AT5G09760 61.552 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01383 - - nnu:104587941 870.152