Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl13g01378 ATGGACATCAGTCACAATAACAACACAGGTGTCGCTTGGGATCTTGACATGACCATGGAGAATCCAATTCTCCATGATCAACTCCCCTATGATTTAGTTTCCCACCAATTCCCTTTTCAAACACATCAAATACCATCATCTGGCCATGTACTCAGTTCAATTTTCCCTAGTGAACAAGTGGGAAACCAGAGGGAAGAACAAGAAGAGCCAGAAGAAGAGCTAGGAGCCATGAAAGAGATGATGTACAAGATTGCAGCGATGCAACCTGTTGATATCGACCCCGCAACAATCCGCAAGCCAAAGAGGCGTAACGTCCGCATTAGCGAAGATCCTCAAAGCATAGCTGCACGCCACAGACGAGAAAGGATAAGCGAGAGGATACGAATTCTTCAGAGGCTAGTTCCAGGAGGGACGAAGATGGACACGGCCTCGATGTTGGATGAAGCCATCCGATACGTTAAGTATTTAAAGAGGCAAGTGCACAAGCTACAGTCAAATCAAAATTCGCCATGTTTTGAAGTTGCAGGTCAGTTAGCAGCTGGAGATTGGCATATTAGATCCAATACTGTTCTTGGTTCTACCTCCTCCTCTATGGAACCTCCTGTAGGAGCTGCTGGATTCACCTTCGGAGGCGGCGACGACATCCCATGCCACCAGTTGTTGTTTAACCATGAGGTAATTAGTGATTAA 690 0.4623 MDISHNNNTGVAWDLDMTMENPILHDQLPYDLVSHQFPFQTHQIPSSGHVLSSIFPSEQVGNQREEQEEPEEELGAMKEMMYKIAAMQPVDIDPATIRKPKRRNVRISEDPQSIAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKYLKRQVHKLQSNQNSPCFEVAGQLAAGDWHIRSNTVLGSTSSSMEPPVGAAGFTFGGGDDIPCHQLLFNHEVISD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl13g01378 229 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 112 166 IPR036638 GO:0046983
Eupl13g01378 229 FunFam BHLH transcription factor 110 171 - -
Eupl13g01378 229 Pfam Helix-loop-helix DNA-binding domain 115 157 IPR011598 GO:0046983
Eupl13g01378 229 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 156 IPR011598 GO:0046983
Eupl13g01378 229 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 53 175 IPR045843 GO:0003700|GO:0006355
Eupl13g01378 229 Gene3D - 110 172 IPR036638 GO:0046983
Eupl13g01378 229 SMART finulus 113 162 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl13g01378 Eupl-Chr13 28826046 28827297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl13g01378 74 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 76.106 1.30e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl13g01378 HLH 2.2e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl13g01378 - - nnu:104589283 281.567